Yersinia rochesterensis: CH54_2887
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Entry
CH54_2887 CDS
T03609
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00730
Thiamine metabolism
ykr01100
Metabolic pathways
ykr01240
Biosynthesis of cofactors
Module
ykr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CH54_2887 (thiC)
Enzymes [BR:
ykr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CH54_2887 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJJ35574
UniProt:
A0ABN4FDZ1
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All DBs
Position
complement(3126745..3128775)
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AA seq
676 aa
AA seq
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MSNNTIAKDLSRPRQSIPRKQQREQAQEFIDTLQGVTFPNSQRIYLQGSRPDIQVPMREI
QLSPTLIGGGKDSPHYEENEAIPVYDTSGPYGDPRAKLDVHAGLPKLRESWIADRQDTAA
LSSVSSGFTQQRLADEGLDHLRFEHLPRPKKALAGQCVTQLHYARAGKITPEMEFIALRE
NMGRERIRSEVLRQQHAGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEPMIIG
RNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPV
PIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLT
GIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAAYDVSLSLGDGLRPGSIQDANDEAQ
FAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDI
APGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKG
HPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGPKFC
SMKISQEVRDYAAKQETAARQELAVVQETAAQHIEVLQSGMEQMSAEFRSRGSELYINKS
HHAPASLQAEANNEPV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatacaattgctaaagatttatcacgcccacgtcagtctattccacgtaaa
caacaacgtgaacaagcccaagaatttattgataccctgcaaggggttaccttccctaac
tcccaacgtatttatctgcaaggctcacggcccgatattcaagtgccgatgcgcgagatc
caactcagcccgacattgatcggcggcggtaaggactctccccactatgaagaaaatgaa
gccattccggtgtatgacacctccggcccttatggtgatccacgcgctaagctggatgtg
catgccggtttacccaaactgcgcgagagctggatagccgatcgtcaggataccgccgcg
ctctcctcggtcagttctggctttacccaacagcgcttggctgatgagggcttagaccat
ttgcgttttgagcatctgccccgccccaaaaaagcccttgcgggccaatgtgtcactcag
ttgcattacgcccgggcaggtaaaatcaccccagaaatggagtttatcgccctgcgggag
aatatggggcgtgaacgtattcgcagtgaagtattacgccaacagcatgcggggcaagca
tttggtgcgcatctgccagagaatatcaccgcagaatttgtccgacaggaagtggccgct
ggtcgagctatcatccccgcgaatattaaccaccccgaatctgaaccgatgattattggt
cgcaactttttggtgaaagtgaacgccaacatcggcaactctgccgtgacctcttccatt
gaggaagaagtggaaaaactggtgtggtcaacgcgctggggcgcggataccgtgatggac
ttatccactggccgctatattcatgaaactcgtgaatggatactgcgcaatagcccagtc
cccattggcaccgtccctatctatcaggcgctggaaaaagtcaatggcgtggcggaaaac
ctaacctgggaaatgttccgcgacaccctgctagagcaggccgagcaaggggttgattac
tttactattcatgccggtgtgctgttgcgctatgtgccgatgaccgctaaacggctgacc
ggtatcgtctcccgtggcgggtcaattatggcgaaatggtgcctttcccatcatcaggaa
aatttcctgtatcagcatttccgcgaaatctgccagatctgcgcggcttatgatgtttca
ttatcattgggtgatggtctgcgccctggttccattcaggatgccaatgatgaagcccaa
ttcgctgagctgcataccttgggcgaattgaccaaaatcgcctgggaatatgatgtgcag
gtgatgattgaaggccctgggcatgtgccaatgcagatgattcgccgcaatatgactgaa
gagctggagcattgccatgaagcgccattttataccttaggccccttgaccaccgacatt
gcccccggttatgaccattttacctccggcatcggcgcggccatgattggttggttcggc
tgcgctatgctgtgctatgtcacccccaaagagcaccttggtttacccaataaagaagat
gtaaaacaggggcttatcacttataaaattgcagcccatgcggctgatttagcgaaaggt
caccccggcgcgcaaatccgcgataacgccatgtcaaaagcgcgttttgaattccgttgg
gaggatcaatttaatttggctctcgaccctgaaaccgcgcgtgcttatcacgatgaaact
ctgccacaagaatccggcaaagtggcgcatttctgctccatgtgtgggccgaaattctgc
tcgatgaaaatttcgcaggaagtgcgcgattacgccgctaagcaagaaacagccgccagg
caagagttggcggtggtgcaagaaacggcggctcaacatatcgaagttttgcaatccggt
atggagcagatgtccgctgagttccgctcccgtggtagtgagttatatatcaataaatca
catcacgcccccgccagtctgcaagcggaggcgaataatgagccagtctga
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