Yersinia rochesterensis: CH54_3303
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Entry
CH54_3303 CDS
T03609
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_3303
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH54_3303
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AJJ36447
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Position
complement(3610588..3611607)
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AA seq
339 aa
AA seq
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MSKKTKVTMSHIAAKAGVSQSTVSLVLNGSYSIKLADDTREKVLRIAQEMGYVHKAVDRP
VVREKIALIINGLINHDPFIEAVSAVQQAAWQHNKLLAIFDQENEPEHCIALEEEISGGG
YQGVIYASCMTNQLAPMFHNLSIPMVMLNGYSPELPDVPCILPADKIGAYKATSHLLDQG
YKRIAILAGELWMDATNDRIYGYRQALINHDICPDERYIQVTNWSLKEAYNKTLVLLALT
PRPEAIFCSSDYIALGCYQAILSQGLHIPDDIAVVGYDNQSIASELTPELSSVDLPYGEM
GELALHTLLKITQQQSLLSLKMRVEGELVIRQSSIRPVK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaactaaagttaccatgagtcacattgcggctaaggcgggagtctctcaa
tcgacggtttcattggtgttgaatggttcctacagtatcaaattagccgacgacactaga
gagaaagtgctgcgtattgcccaggaaatgggttatgtccataaagcagtagatcgaccg
gtagtgagagaaaaaatagcattaataattaatggtttaatcaatcacgacccctttatt
gaagccgtgagtgcggttcagcaggcggcttggcaacataacaaactattggctattttt
gatcaggaaaatgaacccgaacattgtatcgctttggaagaggaaatcagtggaggaggt
tatcagggggtgatttatgcatcctgtatgactaatcaactggcaccgatgttccacaat
ttatctattccaatggtaatgttgaatggttatagtcctgagctgcccgatgtcccttgt
atattacccgcagataagattggtgcttataaagccaccagtcatttattagatcaagga
tataaacggattgctatcttggcgggtgagttgtggatggatgcgaccaatgatcgtatt
tacggttatcgacaagccttaataaaccatgatatttgccctgacgaacgctatatccaa
gtcaccaactggtcattaaaagaagcttataataaaacattggtgttactggcactgact
cctcggccagaagccattttctgtagcagtgactatatcgccttgggatgttatcaggcg
attttgtcacaagggttacatattcctgatgatatagcggtagttggctatgataaccaa
agtatcgcttcagaactcacccctgaattaagctcagtagatttaccctatggcgaaatg
ggggaactggcattgcacaccttgctgaaaattacacaacagcagtctctgttatcattg
aaaatgagagtggagggggagttggtcattcgtcagtcttcaataagaccggttaaatag
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