Yersinia rochesterensis: CH54_3357
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Entry
CH54_3357 CDS
T03609
Name
(GenBank) beta-eliminating lyase family protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00330
Arginine and proline metabolism
ykr00480
Glutathione metabolism
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CH54_3357
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CH54_3357
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CH54_3357
Enzymes [BR:
ykr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CH54_3357
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Ortholog
Paralog
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJJ34239
UniProt:
A0A386HH10
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Position
3667392..3669554
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AA seq
720 aa
AA seq
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MTQLKIATSARLASYVESQRGVVYLNQTDFTDVAAVVMSVEDASAGILSKLNDLGFAIPT
FIAVTAEQTVSTDYLPLIKGVITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MKNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNSFGFIGGIDAHCFDERYLRQQLAEVAPEHVNDTRPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRM
WMDCVKLGIEARKLLLERCSMLRPFIPPTVGGKNWQDYDTDIIANDARFFNFVPNERWHG
FEGYNQDQYLVDPCKLLLTTPGIDANSGQYTQFGVPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENPAKMAHLVDMLAQFERYIEQDALLCDVLPTIYRKNEERYRGYTLRQLCQEMH
NLYVSHDVKQLQKDMFRKASFPPVVMNPQDANIQFIRDNIELIPIAEAEGRIAAEGALPY
PPGVLCVVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVEWRRIFGYVITQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacacagttaaaaatagcaacaagtgctcgtttggcttcttatgtagaaagtcagcgg
ggagtggtatacctcaatcagaccgatttcacagatgttgccgccgtggtgatgtcggtg
gaagatgcgagtgccggtatattgtcgaagctcaatgatttgggttttgctattcctact
tttattgctgttacggcagaacagacggtttctacggattatttgccccttattaagggt
gtcatcacactcggtgaggcaaataaagcattttacaatgctcaggttgaggctgctgcc
agcgaatatcaaaaaaatctgttaccaccttttttctcaacattaaagaaatatgtcgag
atgaaaaattcaacctttgcttgccctgggcaccaaggtggtgagtttttccgtaaacat
cctgctggccgtcagttttttgaattctatggtgagacgattttccggtcagatatgtgt
aacgccgatgtcaaattgggtgacttgcttatccatgaaggtgcggcaaaagatgcacaa
aaatatgcagctaaggtctttaatgcagataaaacctattttgtactgaatgggacttca
tcggccaacaaagtggttactaatgctttattgacccgtggtgatttagtgttatttgat
agaaataaccataaatctaaccatcatggcgcactgattcaagcgggggcgacgccagtc
tatttagaaactgctcgtaattcatttggatttattggtggcatcgatgcgcactgtttc
gatgagcgttatttacgtcagcaactcgctgaagtggctcctgaacatgtgaatgataca
cggccattcagattggcaatcattcagttaggcacttatgatggcactgtgtataacgct
cgtcaggtggttgatagtattggtcatttatgtgattacattttgtttgattctgcgtgg
gtcggttatgagcaatttattccgatgatgaaggatttctcgccactattgctagaatta
aatgaaaatgaccctgggattattgtgactcagtcagtgcataagcagcaggctggtttc
tctcagacttctcaagtgcataaaaaagataaccatataaaagggcaaaaacgccactgt
aaccataagcgttttaacaatgcgtttatgctgcatgcatcaaccagcccgttttaccct
ttattcgccgcgttagatgtgaatgccaaaatacattccggcgacagtggccgccgcatg
tggatggattgtgtaaagctcggtattgaggcccgtaaattattattagagcgctgctca
atgttacggccattcattccacccactgtagggggtaagaattggcaggattacgataca
gatattattgctaatgatgctcgcttctttaattttgtgcctaatgagcgttggcatgga
tttgaaggttataatcaagatcaatacctagttgatccttgcaaattattgctaacaaca
ccaggtattgatgctaacagcgggcaatatacccaatttggtgtgccagcagcgatactg
gcaactttccttcgtgaaaatggtattgtgccggaaaaatgcgatctgaattcgatccta
ttcctgctgacaccggctgaaaacccggcaaaaatggctcatctggttgatatgttagcc
caatttgagcgctatattgagcaagatgcgctgttgtgcgatgtattaccgacgatatat
cgtaagaatgaagagcgctatcgtggctatactttgcgccagttatgccaggaaatgcat
aacttatatgtcagtcatgatgttaaacagttgcaaaaggatatgttccgtaaagccagt
ttcccacctgtcgtgatgaacccgcaggatgccaatattcagtttatccgcgataatatt
gaactgattcctattgctgaagcggaagggcgaattgcggctgaaggggctttgccttat
ccaccaggcgtgttgtgtgttgtgccgggtgaaatatggggtggggcggtgcagcgttat
ttcctggcgctggaagagggcatcaatttattgccgggcttctccccggaattgcagggc
gtttatatcgaaaaaggtgatgtagaatggcggcgtatttttggttatgtcattactcag
taa
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