Yersinia rochesterensis: CH54_3359
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Entry
CH54_3359 CDS
T03609
Name
(GenBank) hypothetical protein
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
CH54_3359
Enzymes [BR:
ykr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CH54_3359
Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CH54_3359
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GFIT
Motif
Pfam:
Mltc_N
SLT
SLT_4
Lysozyme_like
Phage_lysozyme2
SLT_2
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AJJ34229
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Position
complement(3670523..3671716)
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AA seq
397 aa
AA seq
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MFILKVILRRVSNLLRGLCWPRCYLFPNGDIPHQDMACKMKKILALLVIAPLLVSCSGNK
NQAENEAFVKDTNGFEILMGQFAHNIENIWGLKEVLIAGPKDYVKYTDQYQTRSHINFDA
GTITVETIATTDPAAHLRQAIITTLLMGDDPGSIDLYSDANDIQISKEPFLYGQVLDNNG
EPIRWEWRAAHFADYLLQNKMQKRTSGLHVIWSVTLQLVPNHLDKRAHKYLPLVRQSAEK
YGVEESLILAIMQTESSFNPYAVSGSDALGLMQVVQHTAGRDVYKLKGKSGQPSRSYLFD
PANNIDAGTAYLSILQNTYLGGIQNATSRRYAVITSYNGGAGSVLRVFSSDKNQAVNIIN
SMAPGDVFQTLTTKHPSGESRRYLVKVNSAQKSYRRH
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttcatattgaaggttatactccgccgagtcagtaacctattacggggcctatgctgg
ccccgctgttatttattccctaacggggacattcctcatcaagatatggcttgtaagatg
aagaaaattttagctttgttggttattgcaccattgttagtgtcttgttcaggcaataaa
aatcaggcagaaaacgaagcctttgtcaaagacaccaacggttttgaaattttaatgggc
cagtttgcccataacatcgaaaatatttggggattaaaagaagtcttaatcgcgggccca
aaagattacgttaagtatacagatcaatatcaaacccgcagccatatcaactttgatgct
ggtaccattacagttgaaactattgccacgactgatccggcggctcacttacgtcaggcg
attattaccacgttattaatgggcgatgatcctggctcgatcgacctctattctgatgct
aatgacatccagatcagcaaagaacctttcctctatgggcaggtactagataacaacggc
gagcctattcgttgggaatggcgagctgcacattttgctgattatttactgcaaaacaaa
atgcaaaagcgtacctctggtttgcatgttatctggtcggtaaccttgcaattagtgccg
aaccatctggataaacgtgcgcataaatatttgccactggtgcggcaatcggctgagaaa
tatggcgtagaagagtcattaattctggctattatgcaaactgaatcaagctttaaccca
tatgcggttagtggctctgatgcacttggcctgatgcaggttgttcagcatactgccggg
cgggacgtctacaaactgaaaggcaaaagtggtcagccgagccgcagttatctatttgat
cctgctaacaatattgatgctggcacagcctatctatctattctgcaaaatacctatttg
ggcggtattcaaaatgccacctcgcggcgttatgcagttattacctcctataatggcggt
gccggcagtgtgttacgggtattctctagcgacaaaaaccaagcggttaatattattaat
agtatggctccgggcgatgtattccaaacgctaaccaccaaacacccatccggtgaatct
cgccgctatctggtgaaagtgaatagtgcgcagaagagctaccgccgccactaa
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