Yersinia rochesterensis: CH54_3423
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Entry
CH54_3423 CDS
T03609
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CH54_3423 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ykr01007
]
CH54_3423 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ykr03016
]
CH54_3423 (lysS)
Enzymes [BR:
ykr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CH54_3423 (lysS)
Amino acid related enzymes [BR:
ykr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CH54_3423 (lysS)
Transfer RNA biogenesis [BR:
ykr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CH54_3423 (lysS)
Prokaryotic type
Other AARSs
CH54_3423 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AJJ36765
UniProt:
A0A0T9PUJ2
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All DBs
Position
3735376..3736893
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AA seq
505 aa
AA seq
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MSEQKPQVAEQAQELNSELQARREKLAALREKGIAFPNDFRREHLSDQLHAEYGSKENEE
LEALNIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDLGD
ILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RNTFKVRSQVMAGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRT
LTENVLGSSVVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGI
KVEKSWGLGRVQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGG
REIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaaaaccacaagtcgctgagcaagcgcaagaactcaatagtgagttacaa
gctcgtcgggaaaaactggctgcactgcgggagaagggaattgctttccctaatgatttc
cgccgtgagcatctctctgaccagctacatgctgagtacggcagcaaagagaatgaagaa
ttagaagcgctgaatatagaagtcactgttgctggccgtatgatgactcgccgtattatg
gggaaagcatcatttgtgacgctgcaagatgtcggtggccgtattcaactgtacgtttcc
cgtgatgacctgccggaaggcgtgtataacgaagaattcaaaaagtgggatctgggcgat
atcctgggtgcgcgcggtaagttgttcaaaactaaaaccggtgagttgtctatccactgt
agtgaattgcgtttgctgaccaaagcactgcgcccattgccggataaattccacggcctg
gctgatcaggaaacgcgctatcgccagcgctatctggatctgatcgctaacgatgagtcc
cgcaatacattcaaagttcgttcgcaagtgatggccggtattcgtagcttcatggtggaa
aaaggcttcatggaagtcgaaacacctatgatgcaagtgatccctggcggtgcttcagca
cgtccgtttgtgactcatcacaatgcgctggatatcgatatgtatttgcgtatcgcgcca
gaattgtatctgaaacgcctggttgtcggtggttttgaacgtgtgttcgaaatcaaccgt
aacttccgtaatgaaggtgtttcaccgcgccataatccagagttcactatgatggaactc
tatatggcttacgcggactacaaagacttgatcgtgctgactgaagagttattccgcact
ctgactgaaaatgtgctgggcagcagtgtggtgcagtatggcgaacagacatttgatttt
ggtaagcctttcgccaaattgaccatgaaagaagctatttgcaaataccgtcctgaaacc
aatgtggcagatttggacgatatggacaaagctgtggcaattgccgagtcattgggtatt
aaagttgagaaaagttggggcctgggccgtgttcaatgcgagatctttgaagagaccgcc
gagagccatctgattcagccaactttcattactgaatacccagccgaggtttctccattg
gctcgtcgcaatgacgataatccgtttatcactgaccgtttcgaattcttcatcggtggc
cgtgagattggtaacggcttctctgagctgaatgatgctgaagatcaggctcagcgtttt
gctgatcaagtcagtgctaaagaagctggtgatgacgaagcgatgttctacgatgaagac
tatgttaccgcgctggaacatggtttgccgccaactgcgggtctgggcatcggtatcgac
cgtatggtcatgttgtttaccaacagccatactatccgtgatgttatcttattcccggcg
atgcgcccggtaaaataa
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