KEGG   Yersinia rochesterensis: CH54_3484
Entry
CH54_3484         CDS       T03609                                 
Name
(GenBank) NUDIX domain protein
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ykr  Yersinia rochesterensis
Pathway
ykr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH54_3484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ykr03019]
    CH54_3484
Messenger RNA biogenesis [BR:ykr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CH54_3484
SSDB
Motif
Pfam: NUDIX NUDIX_4 Nudt16-like
Other DBs
NCBI-ProteinID: AJJ35311
UniProt: A0A386HHD5
LinkDB
Position
3795117..3795644
AA seq 175 aa
MIDDDGYRPNVGIVICNRQGEVLWARRYGQHSWQFPQGGINPGETPEQAMYRELFEEVGL
NKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLMCNEADINMQRSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAPTVMPVQEIAPPRVPPAYRRKRG
NT seq 528 nt   +upstreamnt  +downstreamnt
gtgatcgatgatgatggctaccgcccgaacgtgggtatcgtaatttgtaatcggcaggga
gaagtgttgtgggccagacgttacggtcagcactcttggcagtttcctcaaggcgggata
aatcccggtgaaacaccagagcaggcaatgtatcgtgaactttttgaagaggtaggactt
aacaaaaaggatgtccgaattctggcttcaacccgtaactggttacgttacaaattacca
aaacgtttggtgcgttgggatacaaagccggtgtgcatcggccaaaaacagcgatggttt
ctactacagttaatgtgtaatgaagccgatatcaacatgcagcgcagcagcaccccggag
tttgatggctggcgatgggtcagttattggtatccggtgcgtcaggtggtgtcttttaaa
cgggatgtttatcgccgcgtgatgaaagagtttgcacctactgtaatgcctgtgcaggag
attgctccgccacgggtaccgcccgcttatcgccgtaaaagaggttaa

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