Yersinia rochesterensis: CH54_3533
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Entry
CH54_3533 CDS
T03609
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00540
Lipopolysaccharide biosynthesis
ykr01100
Metabolic pathways
Module
ykr_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CH54_3533 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ykr01005
]
CH54_3533 (lpxB)
Enzymes [BR:
ykr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
CH54_3533 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
ykr01005
]
Lipid A
CH54_3533 (lpxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
DUF6986
Motif
Other DBs
NCBI-ProteinID:
AJJ34519
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All DBs
Position
3850494..3851678
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AA seq
394 aa
AA seq
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MQNSPLSVDRPSSGGRPLTIGLVAGETSGDILGAGLIRALKAQVPDARFVGVAGPLMQAE
GCEAWFEMEELAVMGVVEVLERLPRLLKIRKELTQRFSELSPDVFVGIDAPDFNITLEGR
LKQRGIRTVHYVSPSVWAWRQKRVFKIGKATDMVLAFLPFEKAFYDRFNVPCRFIGHTMA
DTMPLAPDKHAAKAELGIAPNTPCLALLPGSRHSEVEMLSGDFLRTAAILKQQLPNLEVL
VPLVNSKRREQFERIKAEVTPDLSVHLLDGNARLAMIAADATLLASGTAALECMLAKCPM
VVGYRMKPFTFWLAERLVKTPYVSLPNLLAGEELVTELLQQECQPQKLADALLPLLQGGE
AVEALKERFLILHQSIRCGADEQAAQAVLELAGR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagcccattatctgttgatcgaccgtcaagtggcgggcgtcctttaactata
ggtttagtcgccggtgaaacctccggcgacatcttaggtgcaggattgattcgtgcactg
aaagctcaggttcctgatgcccgctttgttggtgtagctgggcctctgatgcaagctgaa
ggatgcgaagcctggtttgagatggaagaattggcagtgatgggcgttgttgaagtgtta
gagcgcctgccacgtctactgaaaatccgaaaggagctgactcaacgctttagcgagcta
tcgccggatgtttttgtcggtatcgatgctcctgatttcaatattaccctcgaggggcgc
ttgaagcagcgtggcatacgaaccgttcattatgtcagcccatcggtgtgggcctggcgg
caaaaacgtgttttcaaaattggcaaagcgaccgatatggtgctcgccttccttcctttt
gaaaaagcgttttacgatcgttttaatgttccctgccgttttatcggccataccatggcg
gacactatgccattggctcccgataaacacgcggcaaaagctgagcttggcattgcaccc
aatacaccttgtctggctttattgccgggtagtcgccattctgaagtagaaatgctcagt
ggtgattttctgcgcacagcagctattctgaagcaacaattgcccaatctggaagtgctg
gttccgctggtaaatagcaaacgtcgtgagcaattcgagcgaattaaggccgaagttaca
ccggatttgtcagtacatttacttgatggcaatgcccgtctggcgatgattgctgctgat
gcgacgttattggcttccgggactgctgcattagaatgcatgttggccaagtgcccaatg
gtcgttggttatcgtatgaaacctttcacattctggttagccgagcggttggttaaaact
ccttatgtctcattgcccaatttgttggctggtgaagagctagtgacagagttgctgcaa
caagagtgtcaaccgcagaaactagctgatgcgctgctgcctttattgcaaggtggagag
gcggttgaggccttaaaagaacgcttcctgatcttacatcagagcatccgctgtggtgcg
gatgagcaggcggcacaggctgtattggagttagcaggacgatga
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