Yersinia rochesterensis: CH54_356
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Entry
CH54_356 CDS
T03609
Symbol
nifJ
Name
(GenBank) ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00010
Glycolysis / Gluconeogenesis
ykr00020
Citrate cycle (TCA cycle)
ykr00620
Pyruvate metabolism
ykr00650
Butanoate metabolism
ykr00720
Other carbon fixation pathways
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01120
Microbial metabolism in diverse environments
ykr01200
Carbon metabolism
ykr01210
2-Oxocarboxylic acid metabolism
Module
ykr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CH54_356 (nifJ)
00020 Citrate cycle (TCA cycle)
CH54_356 (nifJ)
00620 Pyruvate metabolism
CH54_356 (nifJ)
00650 Butanoate metabolism
CH54_356 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
CH54_356 (nifJ)
Enzymes [BR:
ykr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CH54_356 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_6
Fer4_10
Fer4_16
Fer4
Fer4_9
TPP_enzyme_C
Fer4_21
Fer4_8
Fer4_2
Fer4_17
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
AJJ35456
LinkDB
All DBs
Position
complement(368921..372454)
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AA seq
1177 aa
AA seq
DB search
MITTDGNSAVASVAYRASEVIAIYPITPSSTMAEQADAWSGDGKVNIWGDVPRVVEMQSE
GGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTIATHALSIF
GDHSDVMAVRQTGCAMLCASSVQEAQDFALISQVATLNSRIPFIHFFDGFRTSHEINKIV
PLSDDTLRQLLPQKGIDGHRSRALSPDHPVVRGTSANPDTYFQSREATNPWYNNTYQHVA
DTMQAFAAATGREYKPFEYYGHPQAERVIILMGSAIGTCEEVIDSLLTRGEKVGVLKVRL
FRPFSAKHLLSVLPPSVTKIAVLDRTKEPGALAEPLYLDVMTALAEAYSRGERATLPKVI
GGRYGLSSKEFGPDCALAVFKELSVDLPRPRFTVGIFDDVTGLSLPLTDEKIEQRATLEA
LFYGLGSDGSVSATKNNIKIIGNSTSLYAQGYFVYDSKKAGGLTVSHLRVSKTPINSAYL
ISQADFVGCHQLQFIDTYQMAERLKPGGILLINTPFSADEMWQRLPQEVQAVLHQRKARL
FVINAAKIARECKLGARINTVMQMAFFHLTQILPTAMAQEQLRAAIDRSYSNKGPEIVTR
NWQALDATLDALVEIPLQPIDENSPMRPPIVSDQAPDFVKTVTATMLAGLGDALPVSAFP
PDGTWPVGTTQWEKRNIAEDIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPDAMLGAPDS
LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCYEVCPAKDRQNPEIKAINMQPRLAHLVEE
KAHYDFFLKLPEIDKTQMERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNAEFGLGFRLTVDQHRQRVTRL
INQLAPQLPQDLVGQLLNEDATPEVRREQVIQLRQLLKEIPGNDAQQLATDADYLVDKSI
WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG
KRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAESYPGPSLIIAYSPCEEHGYD
LAYSHDQMKQLTATGFWPLYRFDPRRTDEGKVALALDSRPPNSDLTTTLLNEQRFRRLNT
QEPDVAARLYAEAEKDLKKRYDFLSLLAGKPDKTPTE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgattactactgacggtaacagtgcagtagcttctgtggcctatcgtgccagtgaagtt
attgctatctaccctattacgccaagctctaccatggccgaacaagctgatgcttggtct
ggcgatggcaaagtcaatatctggggggatgttccccgcgtagttgaaatgcagtctgaa
ggcggagccattgctactgtgcatggcgcactgcaaaccggcgcattatcgacctcgttt
acctcctcgcagggattactgttgatgatccccaccctctacaagctggcgggcgagctg
acaccttttgtcctccatgttgcggcccgcaccatcgcgacccacgcgctgtctatcttt
ggtgaccattctgatgtgatggcggtgcgccaaaccggttgcgcaatgctatgcgccagc
agcgtgcaagaagcacaagattttgctttgatttcccaagtggccacactcaatagccgc
atcccatttattcatttctttgatggattccgcacctcgcacgaaatcaataaaattgta
ccactcagcgatgacacactgcgccagctattgccacaaaaagggatagacggccaccgc
agccgggcgctttcgccagaccatccggtggttcgcggtacctccgctaacccggatacc
tatttccagtctcgcgaagcgaccaatccttggtataacaatacttaccaacatgttgcc
gataccatgcaggcttttgccgcggccaccgggcgcgaatataagccatttgaatattac
ggccacccacaggcggagcgcgttattattctgatggggtcagccattggcacttgtgaa
gaagtgattgatagcctgctcacgcgcggtgagaaagtcggcgtgttgaaagtgcggtta
ttccgtcctttctctgctaaacatcttctcagtgtcttgccgccatccgtgactaaaatt
gccgtattggaccgcaccaaagaacccggcgcactggccgaaccgctttatctcgatgtc
atgaccgcgctggcggaagcttatagccggggtgagcgggcaacattgccgaaagtgatc
ggcggccgctatgggctgtcctccaaagagtttggccccgactgtgcgctggcggtattc
aaagaattatctgttgacctgccgcgcccgcgctttaccgtggggatttttgatgacgtg
accggcctgtcattgccactcaccgatgagaaaatcgagcaacgtgccactttggaggcg
ctgttctacggccttggcagtgacggctcggtttcggcgaccaaaaataatattaagatt
atcggcaacagcacctcactgtatgcgcaaggctattttgtctacgactcgaaaaaggcc
ggtggcctgacggtctctcacttgcgagtcagcaaaacgccgattaactcagcctatctc
atcagccaggccgattttgtcggctgtcaccagttacagtttattgatacttatcaaatg
gctgagcgcttaaaaccgggggggattctcttaattaacaccccgttcagtgcggatgaa
atgtggcagcgcctgccgcaagaagttcaggcggtactgcaccagcgcaaagcccgctta
tttgtgattaatgcggcaaaaattgcccgcgaatgcaaactgggcgcgcgtattaatacc
gtcatgcagatggcgttcttccatctgacgcaaatcttgcccaccgccatggcgcaggaa
caattacgggcggccattgaccgcagctacagtaataaagggccggaaattgttacccgc
aactggcaagcgctggatgctaccctggatgcattagtcgaaattccattgcaaccgatt
gatgaaaatagcccgatgcgcccaccgattgtctctgatcaagcgcccgatttcgttaaa
accgtcaccgccaccatgctggccggtttgggcgatgccctgcccgtttcggccttccca
cctgatggcacctggccggtgggcaccacccagtgggaaaaacgcaatattgctgaagat
attcctatctggcagccggatctgtgtacccagtgtaaccactgcgttgctgcttgcccg
cactcggccattcgcgccaaagtagtacagccggatgctatgttgggtgcgccagacagc
ttacaatcgctggatgtcaaagcccgtgatatgcgggggcagaaatatgtattgcaagtc
gccccagaggattgcaccggatgtaatctttgttatgaagtctgcccggcgaaagatcgg
cagaacccagaaatcaaagccatcaatatgcagccacggctggcacatctggtggaagaa
aaagcgcactatgatttcttcctcaaactgccggaaatcgataaaacgcaaatggagcgt
attgatatccgaacttcacagctgatttcgccgctgtttgaatattccggtgcttgctcc
ggttgtggagaaacaccgtatattaaattactgactcagttgtatggcgatcgtctgttg
attgctaacgccaccggttgctcctcaatctatggtggcaacctgcccacgacgccgtat
accaccaacgcggatggccgtggcccagcttgggctaactcactgttcgaggataatgcc
gagtttggtctgggcttccgtctgacggttgaccaacatcgccaacgtgtcactcgcttg
ataaaccagttagctccacagttgccgcaggatttggttgggcaattactcaatgaggat
gcaacacccgaagtccgccgtgaacaagtcatccaactgcgccagctattaaaagagatt
ccgggcaatgatgcccaacaattagccacggatgcagattatctggtcgataaatctatc
tggctgattggcggcgacggctgggcctatgatattggctttggtggtttagaccatgta
ctcagcttgaccgaaaacgtcaatgtgctggtactggatacccaatgttactccaatacc
ggtggtcagcaatccaaagccaccccgctgggggcggtgaccaagtttggtgagcacggc
aaacgtaaggcacgcaaagatttgggtgttagcatgatgatgtacggccatgtctatgtc
gcgcaaatttcgttaggtgcgcagcttaatcaaacggttaaagctattcaggaagccgaa
tcctaccccggcccatcattgattattgcctatagcccttgtgaagagcacggttatgac
ttggcctacagccatgatcaaatgaagcaattaaccgccaccggtttctggccactgtat
cgttttgacccacgccgtaccgacgagggcaaagtggccttagcactggattcccgccca
ccaaacagcgatttgaccaccacattactcaatgagcagcgcttccggcggctcaacaca
caagagccagatgtggcggcgcggttgtatgctgaggctgaaaaagacctgaaaaaacgc
tatgacttccttagcttgttagccggaaaaccggataaaacgccgaccgaataa
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