Yersinia rochesterensis: CH54_3700
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Entry
CH54_3700 CDS
T03609
Name
(GenBank) ABC transporter family protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH54_3700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_3700
Transporters [BR:
ykr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CH54_3700
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
nSTAND3
DEAD
AAA_16
RsgA_GTPase
AAA_29
MMR_HSR1
Dynamin_N
AAA_23
AAA_25
DUF87
AAA_18
TAtT
AAA_33
SbcC_Walker_B
DUF7792
Motif
Other DBs
NCBI-ProteinID:
AJJ35498
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Position
4033437..4035242
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AA seq
601 aa
AA seq
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MTVSRRPKPMSKVKQLWPTLKRLLSYGSPYRKPLGLAVLMLWIAAAAEVSGPLLISYFID
HVVAKGTLPLGLVSGLALAYLLLQLLAATLHYFQALLFNRAAVGVVQRLRIEVMDAALRQ
PLSAFDTQPVGQLISRVTNDTEVIKDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALIS
ICIFPAVLVVMAIYQRYSTPVVRRVRAYLADINDGFNEVINGMGVIQQFRQQVRFGERMA
STNLAHYKARMQTLRLEGFLLRPLLSLFSAMVLCGLLLLFGFSPEGSVGVGVLYAFINYL
GRLNEPLIELTSQQSVMQQAVVAGERIFELMDSAQQGYGTDDRPLTSGRIQVNNVSFAYR
HDKMVLQNISLDVPSHGFIALVGHTGSGKSTLANLLMGYYPVQQGEILLDGRPLSELSHQ
TLRQGVAMVQQDPVVLADSFFANVTLGRDISEQQVWDALETVQLAPLVRELPDGLHSLLG
EQGNTLSVGQKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALQLIRKNTTLVVI
AHRLSTIVEADTILVLHRGVAVEQGKHQELLAAHGRYYQMYQLQLVSEDLAAIDQIETTI
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgagtcggaggccaaaaccgatgagtaaagttaagcaactttggccgacacta
aaacgcctgctttcctatggttccccttatcgcaagccattagggttggcggttctgatg
ctgtggattgctgcggctgctgaggtcagtggcccactgttgatcagttatttcattgac
cacgtggtggcgaaaggcactttgccgctggggttggtcagtgggttggctttggcttat
ttgctactgcaattactggcagccacattgcactattttcaagcattattgtttaatcgc
gcggcagtcggtgtggttcaacggctcaggattgaagtgatggatgcagctttgcgccag
cctctcagtgcttttgatacccaacctgtcgggcaattgatttcccgcgtaacgaacgac
accgaagtcataaaagatttgtatgtgatggtggtgtcgacggtattgaaaagtgcggca
ctaattggcgcgatgctggtggcaatgttcagtctggattggcgcatggcgctgatttcg
atctgtatttttcccgcagtgctggtggttatggcgatttatcaacgttatagcacaccg
gtcgtccgccgggttcgagcctatttagcggatattaatgacggttttaatgaagtcatt
aacggaatgggcgttatccaacagtttcgccagcaagtacgttttggtgagcgcatggcg
tctaccaatctcgctcattataaggcgcggatgcaaacgttgcgtctggaaggtttttta
ttgcgcccattgctgagtctattttcagccatggtgttgtgtggtttattgctgcttttc
ggcttcagtccagagggttctgtgggggtcggggtgctgtatgcgtttatcaactacctt
ggtcgtctcaatgaaccattgattgaattgacatcacagcagtcggtcatgcagcaagca
gtggttgcaggggagcgtattttcgagctgatggacagcgcccaacaaggctatggcact
gatgaccgtccactgacgagcggccgtattcaggttaataatgtcagctttgcttatcgc
cacgataaaatggtgctgcaaaatatttccctggatgtgccttcgcatgggtttatcgcg
ctggttgggcatactggcagtggcaagagcaccctggcaaatttgttgatgggctattat
ccggtgcagcaaggtgaaattttacttgatggtcggccactatctgaattatcacatcaa
acattgcgccagggtgtggctatggtgcaacaagatccagtggtattagccgattcattt
tttgctaatgtgacattaggccgtgatattagtgagcagcaagtgtgggatgcgctggaa
actgtgcaattggctccgctggtccgtgaattgccagatgggttgcacagtttgcttgga
gagcagggcaacaccttgtcagtcgggcaaaagcagcttttggcgatggcacgagtattg
gtgcaggcaccacagattcttattttggatgaagcgacggctaatattgactctggcaca
gagcaagccattcagcgagctttgcaattgatccgcaaaaacaccactttggtggtgata
gctcaccgcctttcgaccattgtcgaggcggatactattttggtattgcaccgtggtgta
gccgttgagcagggtaagcatcaagagttgctggcggcacatgggcgctattatcaaatg
tatcaattgcaattagtcagtgaagatttggcggccattgaccaaatcgaaactacgata
agttaa
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