Yersinia rochesterensis: CH54_3727
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Entry
CH54_3727 CDS
T03609
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr03030
DNA replication
ykr03430
Mismatch repair
ykr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH54_3727 (dnaX)
03430 Mismatch repair
CH54_3727 (dnaX)
03440 Homologous recombination
CH54_3727 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ykr03032
]
CH54_3727 (dnaX)
03400 DNA repair and recombination proteins [BR:
ykr03400
]
CH54_3727 (dnaX)
Enzymes [BR:
ykr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH54_3727 (dnaX)
DNA replication proteins [BR:
ykr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH54_3727 (dnaX)
DNA repair and recombination proteins [BR:
ykr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH54_3727 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_18
AAA_2
AAA_30
ResIII
AAA_14
AAA_16
AAA_assoc_2
PIF1
AAA_7
TsaE
nSTAND3
Pneumo_att_G
Motif
Other DBs
NCBI-ProteinID:
AJJ35865
LinkDB
All DBs
Position
4062085..4064064
Genome browser
AA seq
659 aa
AA seq
DB search
MSYQVLARKWRPKTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGTCANCQEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKVIDV
EVIRVQLEKILLAEQISSDARALQLLARAADGSMRDALSLADQAIAMGDGHVTTATVSQM
LGTLDDEQPLAIIEALVTADGARVMAQLEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYATIEPRLRELARTLPPTDIQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAIIAEPQITERQMVPVSAPAAQADNTQPRPIEAPNYAQQVPQHEAPPLGAVVPVNTVL
PDSTAQLLQARTQLLRQSGTTTPKKNEPAAPGKARPANSALERLASVTERSQQRLAAKST
EEKKPAKKEAYRWTAQNQPEVSAEPVATPKALRSALEHEKTPELSAKLAQEAMARDPWAA
EIGKLQMPKLVQQLALNAFKEEIEPGNICLHLRSAQRHLNSPSAQKALAEALSELHGNAV
TLSVIEDDNLAQRTPLEWRQAIYEEKLAQARQSIIADNNIQTLRRFFDAELDEDSIRPV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtccttgcccgtaagtggcgccccaaaacgtttgcagacgtcgttggt
caggaacatgtcctgacggcgttggctaatggcctttcattagggcgaattcatcacgcc
tatttgttctctggcacccgcggggtaggtaagacttctatagcccggctgttggccaaa
gggcttaattgcgaaacgggtattactgctaccccttgtggcacctgtgcgaactgccag
gaaatcgagcaaggccgttttgttgacttgatcgaaattgatgcagcctctcggactaaa
gtcgaagatacccgagaactgctggataatgttcaatatgcgccagcccgtggccgcttc
aaggtctatttgatcgacgaagttcatatgctgtcacggcacagtttcaatgcattactg
aagactctcgaagagccgccagcccatgtgaaattcctgctggcgacgacagatccacag
aagctgcccgtcaccatactgtctcgttgtttgcagtttcaccttaaggtcattgatgtt
gaggtgattcgtgtccagctcgaaaaaatactgttagccgagcaaatcagtagtgatgct
cgcgcattgcaattactagcacgagccgctgatggcagtatgcgagatgcactcagtttg
gccgatcaagctattgcgatgggagatggtcatgtcacgaccgctaccgtcagccaaatg
ctgggaacattggatgatgaacagccattggccattattgaagcgctggtgactgcggat
ggcgcgcgagtgatggctcagttggagcaagcggcgtcacggggtgttgactgggaaaac
ctattagtcgaaaccttgagtttactgcaccgcattgcgatggtgcagttattgccatcc
atgctggataatcactacgccaccattgaacctcgactacgcgagttggcgcgaacactg
ccgccgactgatattcagctgtactaccagacattgctggtggggcgaaaagagttggca
tatgccccggatcgccgcatgggggttgaaatgaccctattgcgcgcattggcgtttcac
cctaaagcgataattgccgagccgcagattaccgagcggcaaatggtgccagtcagtgct
cctgcggcccaggccgataatacgcagccgcgccctatagaagcgccgaactatgctcaa
caggtgccgcagcatgaggctccgccattaggtgccgttgtaccggtcaataccgtgctc
ccagattccacggcgcaattacttcaagcgcgcacgcagttattgcggcaatcggggacg
accacaccaaaaaagaatgagccggcggcgccaggaaaagcgcggccggcaaactcagca
ttggagcgcttagcttcggtgactgagcgtagccagcagcgcctggcggctaaatctacg
gaagaaaaaaagccagcgaagaaagaagcttatcgttggacggcgcagaatcaaccggag
gtatcggctgagcctgttgctacaccaaaagcattgcgctctgcgttggagcatgaaaaa
acgcccgaactttctgctaaattggctcaagaggcgatggcgcgagatccatgggcagca
gagataggtaagctacaaatgcctaaattagtgcagcaacttgcgctgaatgcatttaaa
gaagaaatagaaccgggtaatatttgccttcacttgcgttctgcccagcgccatttgaac
tcgccttcggcgcaaaaggcactggcagaggcattgagcgaattacacgggaatgctgtc
acacttagcgttatcgaagatgataatctggcgcagcgtactccgttggaatggcggcag
gccatatatgaagaaaagctggcacaagcacgccagtcaattattgcggataataatatt
cagacactgcgtcgtttcttcgacgctgaactggatgaagacagtatccgaccggtttaa
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