Yersinia rochesterensis: CH54_3943
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Entry
CH54_3943 CDS
T03609
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K06146
LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_3943
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH54_3943
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Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_IclR
HTH_10
HTH_3
HTH_Crp_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJJ34994
UniProt:
A0ABN4FBM7
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Position
4257322..4258314
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AA seq
330 aa
AA seq
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MKNQRVTLQDIALLAGVTKMTVSRYLRTPEKVAPETGERIAQVMTEVNYSVDSEGETSLN
QKSPRIGILVPSFNNQIFSDLLAGIESVTAASGYQTLVVNYNYNKEREEEQIVNLLSCQI
SGLILTDSEHTLRADKYLNASELPVAQVMDLEPQFNRITVGFNNYQAAYDMTATLLASGK
QHVVYFGSMSDVRDRKRYQGYSQAMIDTGFAPLHITPNKVSSVSIGAGMLALARQMYPQV
DAIFCTNDDMAVGVLQECLKLGMAVPAEIAISGFHGLDIGQATTPVLASVTTPRFEMGKV
AAEILIKKIKKIPTIEQVDLHYRISLGGTI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccagcgtgttacgttacaggatatcgcgttactagcaggcgtgaccaaaatg
acagtcagccgctacttacgcacgccggaaaaagtggccccagaaaccggtgaacgtatt
gcccaagtgatgactgaagtcaattatagtgttgattcagaaggggaaactagcctcaat
caaaaaagtccaagaattggtattttggtgccatcctttaataaccaaattttctccgat
ttactggctggtattgagtcggtcactgctgctagtggctatcaaacgctggtcgttaac
tataattacaataaagaacgtgaagaagaacaaatagttaatctattgtcatgccagatt
tccgggttgatactcaccgattctgaacatactttacgtgcggataagtacctaaatgct
tcggaacttccggtcgcgcaagtgatggatttggaaccacagttcaaccgtattaccgtc
ggttttaataattatcaggcggcttatgatatgacggcgacactgttggcaagcggcaaa
cagcatgttgtctatttcggttctatgtctgatgtgcgagatcgcaagcgttatcaagga
tatagccaggcaatgattgataccgggttcgcaccgctgcatattacgcccaacaaagtc
tcatctgtctctattggtgccggtatgttggcattggcacgacaaatgtatccgcaagtt
gatgctattttctgtaccaatgatgatatggcggtgggcgtgttacaagaatgcttgaaa
ctgggcatggcggtgccagcggaaatagcgatttccggttttcatgggctggatatcggc
caggcgaccaccccagtgctagccagtgtcaccactccgcgttttgaaatgggcaaagtg
gctgctgaaatattgattaagaaaatcaaaaaaatccctacaattgaacaggttgaccta
cattatcgtatttcactggggggaactatttaa
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