Yersinia rochesterensis: CH54_3977
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Entry
CH54_3977 CDS
T03609
Name
(GenBank) beta-lactamase family protein
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ykr01002
]
CH54_3977
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
CH54_3977
Enzymes [BR:
ykr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CH54_3977
Peptidases and inhibitors [BR:
ykr01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
CH54_3977
Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CH54_3977
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AJJ36636
LinkDB
All DBs
Position
complement(4317249..4318391)
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AA seq
380 aa
AA seq
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MDKRLLKHFSSPLLAAALFTIPLHGYANTELLTSQVVDQYAEHIFYNSGAMGMALVVIDN
NQVVNRSFGETKPGNNLRPRPDSLIRIASITKLMTSEVMVKLAEDGTVKLTDPLQKWAPK
GAKVPAYNAKQPMTLLNLASHTSGLPREQPGGPQKRPVFTWPTKDNRWQWLKLANMTVPP
GVKAAYSNLAYDLLADALSRASGKPYTSLLRDKITAPLGMRNTTLTPTAEQCSRLMIGVG
SSRCENTIAAAGSGGVYSTPEDMQRWMQQFLASNNNARKSTAKREQALYFQRRDLVSLKG
MDVAGQADALGLGWVYMAPNAELPGIMQKTGGGGGFITYMAMIPEKNIAVFVVVTRTQLT
KFTNMSDGVNRLVAQLAKNS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaagattgctgaaacatttttcttccccgttactggccgcggctctgttcact
atcccactgcacggctacgccaacaccgagcttttgacatcacaagttgttgatcaatat
gccgaacatatcttctataacagcggggccatggggatggcgctggtcgttattgataat
aatcaagtagttaaccgcagttttggcgaaaccaagcccggtaacaatttgcgcccacgg
ccagattcattgatccgcattgcctctattaccaagctgatgaccagtgaggtgatggta
aaactggctgaggatggcacagtaaaattaactgaccctttgcaaaaatgggcccctaaa
ggagccaaagtcccagcttataatgcgaaacagccgatgactttgctcaatctggccagc
cacaccagcggcctgcctcgtgaacagcccggtggcccgcaaaaaaggccggtgtttacc
tggccgaccaaagataaccgctggcaatggttgaaactggccaatatgactgtgccccct
ggtgtgaaagcggcttattccaatttggcttacgatttgctggcagacgcgctatcacgc
gcctccgggaaaccttataccagcttattacgagataaaatcaccgcaccgctgggtatg
cgaaacaccaccctcaccccaacggcagagcaatgtagccgtttgatgatcggcgtgggc
agcagccgctgtgaaaacaccatagcggcggcgggcagtggcggggtttactcgacacca
gaagatatgcagcgctggatgcagcaattcttagcttccaataacaacgcacgtaaaagc
acagccaaacgtgaacaagcgctgtatttccaacgtcgcgatttggtttcattaaaaggg
atggatgttgccggtcaggccgatgcgctggggctaggctgggtctacatggcaccaaat
gctgaactgccgggcatcatgcagaaaaccggtggcggtggcggatttattacttatatg
gcgatgatccccgagaagaatattgcggttttcgtggtggtcacccgcacgcaactgacg
aaattcaccaatatgagtgatggcgtgaatcggttggtcgcgcagttagcgaagaatagc
tga
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