Yersinia rochesterensis: CH54_4023
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Entry
CH54_4023 CDS
T03609
Name
(GenBank) tonB dependent receptor family protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_4023
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_4023
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Porin_OmpG_1_2
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
AJJ35528
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Position
4370968..4372941
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AA seq
657 aa
AA seq
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MTFKKSHSAALVIATIISSQASAAETNTPTTDTMVVTATGFQQRIQDSAASISVVTREQI
ENKAYTDITDALKDVPGVVVTGGGSHSDISIRGMSAKYTLILVDGKRVDTRGTRPNSDGS
GIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINVITRKVGKEWHGTVRADATLQED
SNSGDIYQTNAYASGPLIDGLLGLKVSGLLSHRSEDKIIDGYNEQRLRNGAATFTLTPDD
KNEFDFDIGHYVQDRNITAGRTVPLNGKSSDVQYDRNNYAMTHHGYYDFGNSTSYIQRDE
TRNPSRQMKSVDNVFNSQTSFLFDSHTLILGGQYRYEELSDEGNQLASAKDLTKLTRWSW
ALFAEDEWQMTNDFALTGGIRMDQDENYGTHWTPRMYGVWHLAEQWTLKGGVSGGYRSPD
LRQATDNWGQITGGKGDPAIIVGNANLKPERSISQEIGILWDDQEGMNAGVTLFNTDFKD
KITEVRRCTDTTGNASGQCTINGTPYKFISDRTNVDKAITRGVEATFGWDINKDWSLTSN
YTFTQSEQKSGQFSGQPLNQMPKHMLNGTLNWQANEELATWIRANYRGKTSEYLSRTSMG
KTTPSYTFVDIGANYKLTKEVRLMGGVYNVLDKRVDIEVNDKVLDGRRYMVGASYDF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaaaaaatcgcattctgcggccttagttatagcaacaattatctcatctcag
gcatctgctgctgaaactaatacccccacaacagatactatggtggtaacagcaacaggc
ttccaacaacgcattcaagactcggcggcgtctatttctgttgtgacccgcgaacaaatt
gagaataaagcctataccgatattaccgacgccctgaaagatgtgccgggggtggttgtc
actggcggcggtagtcacagtgatatcagtattcgtggaatgtcggcgaaatacacctta
attttggtagatggtaagcgggttgatactcgtggcacgcggccaaatagcgatggctcg
ggtattgagcagggttggttacctccgctggcggctattgagcgtattgaagtggtgcgc
ggcccaatgtcctctttatatggttcggacgccatgggcggggtcattaacgttattacg
cgtaaagtgggtaaagaatggcacggcaccgtgcgtgcagatgccaccttgcaggaagat
tctaattccggcgatatttatcaaaccaacgcctatgcctctggcccattaattgatggc
ttattaggattaaaagtcagcggcctgctgtctcatcgtagcgaagataaaattatcgat
ggctataatgagcagcgcctcagaaatggggctgcgacatttaccctaacaccggatgat
aaaaacgaatttgattttgatattggccattatgtacaagatagaaatatcactgccggg
cgcaccgtgccactaaatggtaaaagcagtgacgtacaatatgaccgtaataattatgcg
atgactcaccacggttattatgactttggtaattcaaccagttatattcaacgcgacgaa
actcgtaatccatcacgccaaatgaaaagcgtcgataatgtctttaatagccaaacctct
ttcctgtttgatagccacacgttaattcttggcggtcaatatcgctatgaagagttatct
gatgaaggtaatcagttagcttcagctaaagatctcaccaaattaacgcgctggagttgg
gcattatttgctgaagacgaatggcaaatgaccaatgatttcgccctgaccggtggtatt
cggatggatcaggacgaaaactatggcactcactggacgccacggatgtacggtgtttgg
catttagctgagcaatggacattaaaaggtggggtatccggtggttatcgttcaccggat
ttacgccaggccactgataattgggggcaaatcaccggcgggaaaggcgatccggccatt
attgttggtaatgctaacctgaaacccgaaagaagtatcagccaggagattggcattctc
tgggacgaccaggaaggtatgaatgccggcgtgacactgtttaacactgattttaaagat
aaaatcactgaagtgcgccgctgtacggataccaccggcaatgcgtcaggccaatgcact
atcaatggcactccttacaagtttatcagtgaccgcaccaacgtggataaagccatcaca
cgcggtgtagaagcaacatttggttgggatatcaacaaagactggtcactgacctcaaac
tatacttttactcaatctgagcaaaagagcgggcagttctccggtcaaccattgaaccaa
atgccaaaacacatgttaaacggcaccttgaactggcaagccaatgaagagctggcaacc
tggatccgggctaactaccgcggtaaaacctcggaataccttagccgcaccagtatggga
aaaaccacaccgtcatatacctttgttgatataggcgctaactataagctgacgaaagaa
gtccgtctgatgggcggtgtctataacgtgctggataaacgcgtagatatcgaagtgaat
gataaagttctggatggccgccgttatatggtgggtgccagctacgatttctaa
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