Yersinia rochesterensis: CH54_4033
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Entry
CH54_4033 CDS
T03609
Name
(GenBank) cys/Met metabolism PLP-dependent enzyme family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00260
Glycine, serine and threonine metabolism
ykr00270
Cysteine and methionine metabolism
ykr00450
Selenocompound metabolism
ykr00670
One carbon pool by folate
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01230
Biosynthesis of amino acids
Module
ykr_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH54_4033
00270 Cysteine and methionine metabolism
CH54_4033
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CH54_4033
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CH54_4033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ykr04147
]
CH54_4033
Enzymes [BR:
ykr01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CH54_4033
Exosome [BR:
ykr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CH54_4033
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
fvmX3
Motif
Other DBs
NCBI-ProteinID:
AJJ36837
UniProt:
A0A386HGM7
LinkDB
All DBs
Position
complement(4379657..4380802)
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AA seq
381 aa
AA seq
DB search
MAKFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGEHTGYEYSRSGNPTRTALEKAIA
ELEGGIRGYAFASGLAACSTVLELLDQGSHIIAVDDLYGGTYRLLEKVRSRTAGLRVTYV
SPADTAALEQAILPDTKMIWVETPTNPLLKLADLAAIAAIAKKHQLISVADNTFASPYIQ
RPLDLGFDIVVHSATKYLNGHSDVVAGVAAVGNNPELAEQLGFLHNAVGGILDPFSSFLT
LRGLRTLALRMARHNESAQRIAEWLEQQPQVENVYYPGLKSHPQHALAAKQMAGFGGMIS
VRLKGDDEFARAVIKRSHLFTLAESLGGVESLISQPYSMTHASIPLETRLKHGITPQLLR
LSVGIEDTEDLIADLGQALNG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttcgataccctaaccgtccatgccggttatactccagatagtaccggtgca
gtgatgcccgcgatttacgcgacctccactttcgcgcaacccgcccccggcgagcatact
gggtatgaatattcccgcagtggcaaccctactcgtaccgcgctggaaaaggcgatcgca
gaattggaaggcggcattcgtggttatgcctttgcctccggtctggccgcctgctcaact
gtgctggaactgctggatcaaggcagccatatcattgctgtggatgatttatacggcggc
acctaccgcctgctggagaaagtacgcagccgcaccgccggtttgcgggtaacttatgtc
tctcctgcggacaccgccgcattggaacaagccattctgcctgataccaaaatgatctgg
gtggagacgccaactaacccattgttaaaactggcggatctggctgccattgccgctatt
gctaaaaaacatcaactgattagtgtggccgataatacctttgcctctccttatattcag
cgcccgctagatttaggatttgatattgtggtgcattcagccaccaaataccttaatggc
cactccgatgttgttgccggtgtcgccgccgtagggaataatcctgaactggcagagcaa
ttgggctttttacacaatgcggttggcgggattttagaccctttcagtagcttcctgaca
ttacgcggtttgcgcactttggctttgcgcatggcgcgacataatgagagcgcacagcgc
atcgccgaatggctagagcaacagccacaggtggaaaatgtgtattatccggggctgaaa
agtcacccgcaacacgcgctggccgccaaacagatggccggttttggtggcatgatttcg
gtgcgattgaaaggcgatgatgagtttgctcgcgccgtcattaagcgctcacatttgttt
actctggctgaaagtcttggcggcgtcgaaagcttaatcagccaaccctatagcatgacc
catgcatcaatcccactggaaacccgcttaaaacacggaattactccgcaactcttgcgt
ttatccgtcgggattgaagataccgaagatttgattgcagacttaggacaagcgctgaat
ggctaa
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