Yersinia rochesterensis: CH54_4083
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Entry
CH54_4083 CDS
T03609
Name
(GenBank) sigma-54 interaction domain protein
KO
K07478
putative ATPase
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CH54_4083
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_19
AAA_14
AAA_30
AAA_3
ResIII
Sigma54_activ_2
AAA_28
AAA_24
ABC_tran
DUF815
AAA_18
RNA_helicase
AAA_2
Cdc6_lid
ATP-synt_ab
Resolvase
AAA_11
AAA_25
AAA_33
DUF5906
IstB_IS21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AJJ35216
UniProt:
A0A386HFV4
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All DBs
Position
4440118..4441461
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AA seq
447 aa
AA seq
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MSNMSLDFSQNEFQPLAARMRPLTLEQYIGQQHLLAPGKPLPRAIVAGQLHSMILWGPPG
TGKTTLAEIIGRYGQADVERISAVTSGIKEIREAIERARQNRDAGRRTILFVDEVHRFNK
SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKALTAADIEKVIEQAMSD
SSRGYGGQNIKLPDETRRMMSELVGGDARRALNSLEMMADMAEIDANGVRVLTPDLLKEV
SGERSARFDNKGDRYYDLISAVHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIAS
EDIGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMQDA
RDKPDFDVPEHLRNAPTKLMKEMGLGAEYRYAHDEQHAYAAGENYFPPEMATTRYYLPSS
RGLEGKIGEKLAWLAEQDQNSPIKRYR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatatgtccctcgatttttcccagaatgaatttcagccattggccgcgcggatg
cggcctttgacgttggaacaatatattggtcagcagcatttgctggcaccgggtaaaccg
ttaccgcgggcgatcgttgctggacaattacactcgatgatcctctgggggccgccgggg
accggcaaaactactttggcagaaattattggccgctatggtcaggcggatgtcgaacgt
atttcagcggtgacctctggcattaaagagattcgcgaagcgattgagcgcgcgcggcaa
aatcgtgatgcaggtcggcggacaattttatttgtcgatgaagtccatcgtttcaataaa
agtcagcaagatgcgtttttacctcatattgaagatggtaccatcacctttattggcgcc
acgacagaaaacccgtcatttgaactgaattcggcgttgctctccagagctagggtctat
ttgctgaaagctctcaccgctgccgatattgaaaaagttattgagcaagccatgtcagac
agcagtcgaggctatggtgggcagaatataaaactgccagatgaaactcgccgtatgatg
tctgaattggtgggaggcgatgcgcgccgggccttgaatagccttgaaatgatggcagat
atggcagaaatagatgccaatggggtgcgggtattgacccctgacttactgaaagaggtg
tctggcgaacgtagtgcgcgctttgataataaaggcgatcgttattatgaccttatctcg
gcagtccataagtctattcgtgggtccgcgcccgatgccgccttgtattggtatgcgcga
attatcacggcaggcggtgatccgctctatgtggctcggcgtttattagccattgcatcg
gaagatatcggtaatgccgatcctcgcgcaatgcaagtggctatatcagcatgggactgt
tttacccgtgttggtccggcggaaggtgagcgagcgattgctcaggcgattgtttatttg
gcttgtgcgccgaaaagtaatgcggtttacacggcgtttaaagccgccatgcaggatgcg
cgtgataaacctgattttgatgtgccggaacatctgcgtaatgcgccaaccaaactcatg
aaagaaatggggttaggggctgaataccgttatgcccatgatgaacaacatgcttatgct
gccggtgagaactatttcccgccagaaatggccacaacccgctactatttaccgtcatcc
cgaggtctggaaggcaaaattggtgaaaagctggcatggctggctgagcaggatcaaaat
agcccgataaaacgctaccgctag
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