Yersinia rochesterensis: CH54_4099
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Entry
CH54_4099 CDS
T03609
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH54_4099 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_4099 (msbA)
Enzymes [BR:
ykr01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CH54_4099 (msbA)
Transporters [BR:
ykr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CH54_4099 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
DEAD
AAA_29
AAA_16
AAA_22
APS_kinase
nSTAND3
AAA_25
ABC_membrane_2
MMR_HSR1
AAA_15
AAA_18
AAA_24
SRP54
6PF2K
SLFN-g3_helicase
AAA_7
G-alpha
DUF87
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AJJ36911
UniProt:
A0A0T9KVX5
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All DBs
Position
4461251..4462999
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AA seq
582 aa
AA seq
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MMNDKDLSTWQTFRRLWPLISPYKTGLVVAAIALILNAASDTFMLSLLKPLLDDGFGKAN
SSILKWMPLAVIGLMVVRGITGFISSYCISWVSGKVVMHIRRRLFSHMMGMPVSFFDQQS
TGTLLSRITYDSEQVAASSSGALVTVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSI
SIRLVSKRFRNISKNMQSTMGEVTTSAEQMLKGHKEVLIFGGQKVETERFEAVSNRMRQQ
GMKLVSASSISDPIIQLIASFALAFVLYAASFPSVMETLTAGTITVVFSAMIALMRPLKS
LTNVNAQFQRGMAACQTLFTILDMEQEKDEGKLEVERAKGEIEFRHVTFYYPGKDTPALN
DINMHIDAGKTVALVGRSGSGKSTIANLMTRFYDVSEGSILLDGHDLRDYRLGALRNQVA
LVSQNVHLFNDTVANNIAYARDEQYSRAEIEEAARMAYAMDFINKMENGLDTVIGENGVM
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEILVIEDGRIVERGMHAELLAKKGVYAQLNRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataaagatctatccacttggcagacgtttcgtcgcctctggccattgatc
tctccttataagaccggtcttgttgttgcagcgatagcattaatccttaatgccgccagt
gacacctttatgctgtcattactaaaacccttgcttgacgatggttttggtaaggctaat
agctcaattttaaaatggatgcctctggccgttatcggcttaatggtggttcgtggcata
actggctttatttcaagctattgcatctcgtgggtctctggcaaagtagtgatgcatatc
cgtcgccgcttattcagccatatgatgggaatgccggtttcattttttgaccagcaatca
accggtacattgctatcacgtattacttatgactccgaacaggtagcagcatcatcttct
ggcgcactggttacagtggtgcgagaaggggcttctatcatcggtttgtttattatgatg
ttttattacagctggcagttgtcgctgattttaatcgtcattgcaccgattgtgtcgatt
tctatccggttggtatctaagcgttttcgcaatatcagtaaaaatatgcaaagcaccatg
ggggaagtgaccaccagtgcagagcaaatgctgaaagggcataaagaagttttgatcttc
ggcggccaaaaagttgaaactgagcgctttgaagctgtgagtaaccgcatgcgccagcaa
gggatgaaactggtttctgcttcttcgatttcagatcctattatccagttgatagcttct
tttgctttggcatttgtattgtatgcagcaagctttcccagtgtgatggaaacactgacc
gccggtactattaccgtggtgttctcagccatgattgcgctgatgcgtccgttgaaatca
ctgaccaatgtgaatgctcaattccaacgtgggatggctgcttgccagacattgttcact
attttggatatggagcaggaaaaagatgaaggtaaactggaagttgaacgcgctaaaggc
gaaatagaattccgccatgtgacgttctactatccgggcaaagataccccggcactgaat
gacatcaatatgcatatcgatgccggtaaaacggttgcattggtggggcgctcaggctcg
ggtaagtcaactatcgctaatttaatgactcgtttctatgatgtcagtgaaggcagtatt
ttgttggatggtcatgacttacgtgattaccgattgggtgcattacgcaaccaggtcgcg
ttggtgtcgcaaaatgttcatctgttcaatgatacggtggcgaataacattgcttatgcc
cgtgatgagcagtacagccgcgcggaaattgaagaagctgcccgcatggcttatgccatg
gactttatcaataaaatggaaaatggcctggacaccgttattggtgaaaacggcgtcatg
ctctccggtggtcagcgccagcgcattgccattgcacgggcgctgttacgggattgccca
atattgattctggatgaagcgacttcggcactggatactgaatcagagcgggcaattcag
gccgcattggatgaattgcagaaaaaccgtacttcactggtcattgcccaccgtttgtcg
accatcgaaaaagcagatgagatcctggtcattgaggatggacgcattgtggagcgcggc
atgcatgcagaattgctggcgaaaaagggcgtttatgctcaacttaaccgtatgcagttt
ggccaatga
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