Yersinia rochesterensis: CH54_503
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Entry
CH54_503 CDS
T03609
Name
(GenBank) pseudouridine synthase family protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ykr03009
]
CH54_503
Enzymes [BR:
ykr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CH54_503
Ribosome biogenesis [BR:
ykr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH54_503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJJ37738
LinkDB
All DBs
Position
complement(539116..540165)
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AA seq
349 aa
AA seq
DB search
MSEKSKDQKLPNVKLSSPKPQDDKVVGEKTKVVGEKLQKILARAGHGSRREIETIIQQGR
VSVDGKISKLGDRVEVTQATKIRLDGHLLSITESEEAVCRVLAYYKPEGELCTRNDPEGR
PTVFDRLPKLRGSRWVAVGRLDVNTSGLLLFTTDGELANRLMHPSREVEREYAVRVFGQI
DDEKIKQLSRGVQLEDGPAAFRTISFQGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVS
RLIRVRYGDINLPKGLPRGGWTELDLKATNYLRELVELDSETVSKLPVEKDRRRVKANQI
RRAVKRHTEVAGRQVAGRQGSARKSSTRQNAGNAAPAAATGRRGSNKRG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaagtcaaaagaccaaaagttacccaacgtaaagttatccagccctaaaccg
caggatgacaaggttgtgggtgaaaaaacaaaagttgtaggtgaaaaattacagaaaatc
ttggcacgggccggtcatggctcacgtcgggaaatcgaaacaattattcaacagggccgc
gtcagcgttgatggtaaaatatcaaagttgggtgatcgcgttgaagtcacacaggccaca
aaaattcgcctggatggtcatcttctttctattacagaatctgaagaggctgtgtgccgt
gttctggcgtattacaagccggaaggtgaactctgtactcgtaatgaccctgaaggccgc
ccaacggtatttgatcgtctgcctaaactgcgcggttcgcgttgggttgcggtagggcgt
ttggacgttaatacctccggtttattgctgtttaccactgatggtgagctggccaaccgc
ttgatgcatcccagccgtgaagttgaacgcgaatatgcggtgcgcgtgtttggtcaaatc
gatgacgaaaaaatcaagcaacttagccgtggtgttcaattggaagatggcccagcggca
ttccgcaccattagtttccaaggcggagaggggattaatcagtggtataacgtcactttg
actgaagggcgcaaccgcgaagttcgccgcttgtgggaagctgtcggtgtacaagttagc
cgcctgatccgtgtacgttatggtgatatcaatctgcccaaaggcctgcctcgtggcggc
tggactgaattggatttgaaagccactaactacctacgtgagttggtggagctggactct
gaaactgtcagtaaattgccagttgagaaagaccgtcgtcgggttaaagcgaatcaaatt
cgtcgtgcggttaaacgccataccgaagtcgcaggccgtcaggttgccggtcgtcaaggc
tcagcgcgtaaaagttctacccgccaaaatgcaggtaacgcagctccagcagccgctacc
gggcgtcgtgggtctaacaagcgcggataa
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