Yersinia rochesterensis: CH54_604
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Entry
CH54_604 CDS
T03609
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00061
Fatty acid biosynthesis
ykr00071
Fatty acid degradation
ykr01100
Metabolic pathways
ykr01212
Fatty acid metabolism
ykr02024
Quorum sensing
ykr04146
Peroxisome
Module
ykr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CH54_604
00071 Fatty acid degradation
CH54_604
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CH54_604
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH54_604
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ykr01004
]
CH54_604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ykr04147
]
CH54_604
Enzymes [BR:
ykr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CH54_604
Lipid biosynthesis proteins [BR:
ykr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CH54_604
Exosome [BR:
ykr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CH54_604
Exosomal proteins of breast cancer cells
CH54_604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJJ36246
LinkDB
All DBs
Position
complement(654314..656008)
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AA seq
564 aa
AA seq
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MEKVWLKRYPADVPAEIDPDRYSSLVEMFENAALRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GAVAIVIVSNFAHTLEKIVFKTQVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTALQKGRRMQYVKPDVINTDMAFLQYTGGTTGVAKGAMLTHRNMQSNLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTMNCLLFIELGGRSLLITNPRDIPGMVKELSRYPF
TAMTGVNTLFNALLNNEEFTQLDFSTLRLSVGGGMPVQKAVAEKWENLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLVDDEGNDVALGEPGELWVRGPQVMLGYWQ
RPEATDEVLKQGWLATGDIATIDEQGFLRIVDRKKDMILVSGFNVYPNEIEDVVALHAKV
LESAVVGVPNEVSGETVKLFVVKKDVSLTQEELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQIKAKVSEQNAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtatggctaaagcgatacccggcagatgtccccgcagaaattgacccggat
cgctattcttctttggtggaaatgtttgagaatgccgcgttgcgttatgcggaccaacct
gcgttcatcaatatgggggaggtgatgaccttccgtaagctggaagagcgtagccgtgct
ttcgccgcctatctacagcaaggtctgggattgcaaaaaggcgatcgcgttgcattgatg
atgcctaacctgctgcaatatcctattgctttgtttggtattctgcgtgctggcatggtt
gtggtgaatgttaatccactgtataccccacgagagctagagcatcagctcaatgatagt
ggcgctgtggctattgttattgtttccaattttgcccatacactggaaaaaatcgtgttt
aagacccaagttaagcacgttattttaacgcgtatgggcgatcagctgtcgacggcaaaa
gggacactggtcaatttcgtggtgaaatatatcaagcggctggtgccgaaatactatttg
cctgatgccatttcattccgcacggcattacagaaaggccgccggatgcaatatgtgaag
ccggatgtcatcaatacagatatggcattcttgcaatataccggcggtacaactggcgtg
gcgaaaggggcgatgttgacccaccgtaacatgcaatcgaacctggaacaggccaaagcg
gcctatgccccattgttacaaccgggccatgagctggtggtgacggcgctaccgctctat
cacatttttgcgttgaccatgaattgcctactattcatagaactgggcggccgcagttta
ttgataactaacccgcgtgatataccgggcatggtgaaagagcttagtcgctacccattc
acggcgatgaccggggtgaacacattatttaatgcgctgttaaataatgaggaattcacc
caattagacttctccactttgcgcctttctgtcggcggcgggatgccagtacagaaagcc
gtggctgaaaagtgggaaaatctaaccgggaaacatttactggaaggctatggtttaacc
gagtgttcgccgttagtcactggcaacccttatgatttgaagcattacagcggcagtatc
ggcctgcctgtgccctctaccgatgttcggctggttgatgatgagggtaacgatgttgct
ttgggggaaccgggcgaactgtgggtgcgtgggcctcaagttatgttaggctattggcag
cggcccgaagcgaccgatgaagtcctaaaacagggatggctggcaacaggtgatatcgcg
acgatagatgaacaaggtttcttgcgaattgttgaccgcaaaaaggatatgattctggtt
tccggttttaacgtctaccccaacgagattgaagatgtggtggcgttacatgcgaaagtg
ttggagtctgcggttgtaggggtgcctaatgaggtctccggtgagacagtaaaattgttt
gtcgtgaaaaaagatgtctcattgacgcaggaagagttgttaacccattgccgccgctac
ctaacagggtataaagtaccgaaaatagtagagttccgcgacgagttgccgaaatcgaat
gtcggtaaaattttgcgtcgagaactgcgtgacgaacagattaaggccaaagtcagcgaa
caaaacgcggcttaa
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