Yersinia rochesterensis: CH54_696
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Entry
CH54_696 CDS
T03609
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ykr
Yersinia rochesterensis
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Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_2
TPR_7
TPR_11
TPR_1
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AJJ35205
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Position
complement(751380..753848)
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AA seq
822 aa
AA seq
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MYNAFTTLLRPLHRHRMTLLALLISGLSVNPVLADTQYDSLIIKARAGDTAPVLDYLQKE
SKAGPLNSGQVDDWLQIAGWAGRDQEVIDVYERYYSSINLSSRGLASAARAYRNEKRWDQ
ALALWQSSLKKDPTNPDLITGMIMTQADSGRGGAALQQAKELADRNPSAQNYMTLAYLNR
ATDRNYDALQASSEAVRLAPESEEVLKSHLEILQRNRIADPALQLAKENPKLVTAEQYRQ
LERDAAAEQVRMAVLPTRSETERFYIADQALADYQDLLARWSKEPEAQDDYQRARIDRLG
ALLVRHHTEELIKEYESMEAEGYKMPDYARRWAASAYIDRRMPEKAAPILTSLYYADGKT
FRNSDDLLDADDLYYALNESEQLDKAHQFAKNYSEQTPYQVGVYGLPGKEPNDDWMEGQT
LLVQSLVALNDLPAAQKKLETLSSTAPANQNLRIALASVYLARDLPRKSEQELKAVESLA
PRSLILERAQAETAMDLQEWHQMELLTDDVIARSPEDVPSQELDRQRKVHNMYELRVTGN
RVISSGSPITGDKDYGLEAILYSPPIAENWRVFGGGSFDNAQFEEGKGINRATRLGGEWT
SRDHWAEAEVNNQNYGFGNKTGFRLSTWYEFNDHWRVGGQLERLAKDTPLRAMKNNITAN
SASAFVLWKNDERRDVEFNITPSDFSDGNNRWEYELNGRQRIWSGPYLTADFNLGLAAST
NTKEDVIYYNPKRDFTYVPAVTLNHIMYRHYKTIWSQQVQLGVGGYWEKNYGNGLVTTAS
YGQRVQWNDVVDTGLALTYDKRPYDGVREHDLSLAFDLNYRF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcatttacgacactgctgcgcccgttgcaccggcacagaatgactttatta
gcgctattaatttccggtctttctgttaatcccgtattggcagatacacagtatgattca
ttaatcatcaaagccagagctggggataccgcaccggtccttgattatttacagaaagaa
tctaaagcagggccacttaatagtggtcaagttgacgactggctgcaaattgcgggatgg
gctgggcgtgaccaggaagtcattgatgtttacgaaagatattattcttcaataaatctc
tcctcacgtggcctggcttctgcggcgcgtgcttatcgtaatgaaaaacgttgggatcaa
gctttggcactgtggcaaagcagcttaaagaaagaccccactaaccccgaccttatcact
ggcatgatcatgacacaggcggattctggtcgtggtggcgcggctttacaacaggcaaaa
gagttagctgaccgcaacccctcggcgcaaaactatatgactctggcttatctgaaccga
gccaccgatcgcaattatgacgcattacaggcctccagtgaggcggtgcgattagcgcca
gaatctgaggaagtattaaaaagtcacctcgagattttgcaaagaaaccgtattgccgac
ccagcattacagcttgctaaagagaacccaaaactggttacggccgagcagtatcgacag
cttgaaagagatgcggcggctgaacaagttcgtatggccgtgctaccgacccgcagtgaa
acagaacgtttttatatcgcggatcaggctttggcagattatcaggatttattagcccgt
tggagcaaagagcctgaggcgcaggacgattatcagcgggcgcgaattgataggctcggt
gcattattggttcgccaccataccgaagaactgattaaagaatatgaaagcatggaagct
gagggctacaaaatgcctgattatgcccgccgttgggcagcttctgcttatattgatcgc
cggatgccggaaaaagctgcaccaattctcaccagtttgtattacgccgacggtaaaaca
ttccgcaacagtgatgacctgctggatgctgatgatctctattacgctttgaatgaaagt
gagcagttggataaggctcatcaatttgccaagaactacagcgaacaaactccttatcag
gtgggggtgtatggtctgccgggcaaagaacccaatgatgattggatggaaggtcagacc
ttgctggttcaatcgctggtggcccttaatgacctgccggcagcccagaaaaaactggag
accctctccagcacggctcctgctaaccaaaatttacgcattgctttagccagcgtttat
ctggccagagatttgccgcgtaaatcggaacaagagttgaaggcagtcgagtcgctagca
ccacgcagcctgattctggaacgggcgcaagctgaaacggcgatggatctgcaagagtgg
catcagatggaattattgactgacgatgtgattgcgcgctctccggaagatgtgccgtcg
caagaattagaccgccaacgcaaagttcataatatgtatgaactgcgggtgaccggtaac
cgcgtcatctcctctggaagccccatcacgggtgacaaagattacggccttgaggcgatt
ttatatagcccacctattgccgaaaactggcgcgtgtttggcggcgggagctttgataat
gctcaatttgaagaaggtaagggtatcaatcgtgcgacccgattagggggcgagtggact
tcccgtgaccactgggctgaagctgaagtgaataatcagaattatggttttggcaataaa
accggattccgtttatcaacctggtatgagtttaatgaccattggcgggtgggtggtcag
ctcgaaagattggcgaaagatacgccgctgcgggcgatgaaaaacaatatcaccgccaac
agtgcctctgcatttgtgttgtggaaaaacgatgaacgccgtgatgttgaatttaatatc
accccgtctgatttctctgacggtaacaatcggtgggaatacgaattgaatgggcgtcag
cgtatctggagcggcccttacctgacggccgatttcaatttagggttggcagctagcacc
aataccaaagaagacgtgatttattacaatccaaaacgtgatttcacttatgtacccgcg
gtgaccttaaatcacattatgtaccgccattataaaactatctggagccagcaagtgcaa
ctgggtgtcggtggctactgggagaaaaactacggcaatggcctggttaccacggcaagt
tatggccagcgtgtgcaatggaatgatgttgtcgataccggattggccctaacctacgat
aagcgcccttatgatggggtccgtgagcatgacctctcactcgctttcgatttgaattac
cgtttctaa
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