Yersinia rochesterensis: CH54_718
Help
Entry
CH54_718 CDS
T03609
Name
(GenBank) PAS fold family protein
KO
K07701
two-component system, CitB family, sensor histidine kinase DcuS [EC:
2.7.13.3
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH54_718
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ykr01001
]
CH54_718
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ykr02022
]
CH54_718
Enzymes [BR:
ykr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CH54_718
Protein kinases [BR:
ykr01001
]
Histidine kinases
CitB family [OT]
CH54_718
Two-component system [BR:
ykr02022
]
CitB family
DcuS-DcuR (C4-dicarboxylate metabolism)
CH54_718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_3_2
HATPase_c
HATPase_c_5
SPOB_a
PAS
dCache_1
PAS_4
HATPase_c_2
Cache_WalK
PAS_10
HATPase_c_3
PAS_8
PAS_7
SpoVT_C
Imm51
Motif
Other DBs
NCBI-ProteinID:
AJJ35726
LinkDB
All DBs
Position
778290..779963
Genome browser
AA seq
557 aa
AA seq
DB search
MNNATTAGKQKVPLRLSTSITLMVSGVIISVLLVVHSLFFIQLSQMAQDGLQNKAVAVAR
VLSFSPTIINGLTNPEAGRQIQAYTREVQQANDLLFIVVTDMNGIRYSHPNPEMIGQHFI
GNDLQPALQGKENSAINRGVLERALRIFIPVYEPHGKQIGVVAIGISLTSIDSVVSETRW
TIPWTILFGALIGSLGTWLLVKTLKKIMLGFEPYEISNLFEQRNAMLQSIKEGVIAVDAN
SRITVVNHEAKRLFKQSGPMENLLLSNASKYWPVRLYLQQVLETGIARRDEEINFNGSIL
LTNTVPVVVKGDIIGAIATFRDKTEVSQLMQRLTGMVHYADALRAQSHEFMNKLHVILGL
LHMKYYQQLEDYIVKTSNNYQAEIGSLLRKIKSPVIAGFLLGKINRARDLGITLSISDDS
LLPDIDNEQITTTLITVLGNLIENAMEAIGDQSQREINVSFHYQHGRVHCVVSDDGPGIA
AELQDSIFDNGFSTKGNEHGIGLSLVRQSLESIGGNIEFDSEAGVFTQFFISLPYDITLN
NTTSSDNISNNSAVNHD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgcaacaacggctggaaagcaaaaagtgccgttacgactcagtacgtcgatc
actctcatggtttcaggagttattatttctgtgctattggtggttcactcgctattcttc
attcagctcagccagatggcacaagatggtttgcaaaacaaagcggtagctgtcgctcgg
gtcttatcattttcaccgaccataattaatggattaactaatcctgaagcaggacgacaa
attcaggcttatacccgcgaagttcaacaggctaatgacctgctatttattgttgtgact
gatatgaatggcattcgttattcacatcctaatcctgagatgatcggacaacattttatc
ggcaatgatttgcaacctgcgctacagggcaaagaaaatagcgcgataaaccggggtgta
ctggaaagagcgttgcgtatttttattcctgtctatgagcctcacgggaaacaaataggc
gtggtggccattgggatttctcttaccagtattgattcggttgttagtgaaacccgctgg
actatcccgtggaccatattatttggggcacttattggctcactcggcacctggctttta
gtgaaaacactgaaaaaaatcatgttgggtttcgagccatacgaaatatctaacttattt
gaacagcgcaacgcgatgctgcaatcgattaaagaaggcgttatcgctgttgatgctaat
tcacgtattactgtggttaatcacgaagccaagcgtttatttaaacaaagtgggccaatg
gagaatttactactcagtaatgccagcaaatattggcctgtgcgtttgtatttacagcaa
gttctggaaaccggtattgcccgccgtgatgaggaaataaactttaatggcagtatattg
ctgaccaataccgttccggtggtcgtgaaaggcgatattattggtgccatcgccactttc
cgcgataaaactgaagtcagccaattgatgcagcgcctgaccggtatggtgcattatgcc
gatgcattacgagcacaatcgcacgagtttatgaataaactccacgttattttgggctta
ttgcatatgaagtattatcaacaacttgaagattatattgttaaaacatccaataattat
caggcggaaattggttccctactgcgcaagataaaatcccccgtgattgcaggattttta
ctgggcaaaatcaatcgagcgcgcgatttgggcattacattatccatcagcgacgatagc
ctgttaccggatattgataatgaacaaataacgacgaccttaattacagttttaggcaat
ctgattgagaatgccatggaagccattggtgaccagtctcaacgggaaattaatgtcagc
ttccattatcaacatggccgggtacattgtgttgtcagtgatgatgggccaggtattgca
gcagagttacaagacagtatttttgataatggtttttccaccaaagggaatgaacacggc
ataggtttaagcctggttcggcagagtttagaaagtattggcggcaatattgaatttgat
tctgaagcgggcgtttttacacaattctttatcagtcttccctacgatatcaccttgaat
aacacgacttctagtgacaatatttcaaacaacagcgcggtaaatcatgattaa
DBGET
integrated database retrieval system
