Yersinia rochesterensis: CH54_938
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Entry
CH54_938 CDS
T03609
Name
(GenBank) helix-turn-helix domain protein
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_938
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CH54_938
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
AJJ37257
LinkDB
All DBs
Position
complement(1025123..1026025)
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AA seq
300 aa
AA seq
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MISASSLNSELINKIAQDFAQATGLAVVVVNIHGEEISDLFNFTPFCQLMRQDPVNHLRC
RMSDRCGGLEASKSNEPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLHSDVYLIDIL
NIDNHWQQDLALMDEFHNVPIIDFSRVIASADLLKLIVENCLKKHLNFVVINDNMGSKEP
GRIRPVHPHDSKMKKALRYIDAHLSEELRLEEVAAKVYLSPYYFSKLFKKYHGIGFNAWV
NQQRMANAREMLQHSDWSIASIAKNLGFSQTSYFCKVFRQTYNVTPQVFRSLSSERSKME
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgccagttctctaaactcagagctcataaataaaatcgcgcaggattttgct
caggcaactgggctggctgtggtggtggtcaatattcacggcgaagaaatttctgatctc
tttaatttcacgccattttgtcaattgatgcgacaagacccggtgaatcatcttcgttgc
cgcatgagtgatcgctgcggtggtttggaagcctcaaaatccaatgaaccttgtatttat
cgctgccacgccgggttaactgacttctctattccgctggttattgccggtcatttggta
gggtttgttttatgcgggcaggtgcggttgcactcagatgtttatcttattgatattctt
aatattgataatcattggcagcaagatctggcactgatggatgaattccacaatgtgccc
attatcgatttttcgcgcgtgattgcgtcggcagatttattaaagctgattgttgaaaat
tgtctcaaaaaacatctcaactttgtggttatcaatgacaacatgggcagcaaagaaccc
ggcagaatacggccggttcatccccatgacagcaaaatgaagaaagcactgcgttatatt
gatgcgcatttatcggaagaattgcggctggaagaagtcgcggctaaggtgtatctcagc
ccttactatttcagcaagttgtttaaaaaatatcacggcatcggctttaatgcctgggtc
aatcagcaacggatggctaatgccagagagatgttgcagcacagtgattggagcattgct
agcattgctaagaatctaggtttttcccagaccagctatttctgcaaagtgttccgtcag
acctacaatgtgacaccgcaggtatttcgctcactttcttctgaacgcagcaagatggag
taa
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