KEGG   Yarrowia lipolytica: 2905837
Entry
2905837           CDS       T01033                                 
Symbol
YALI2_A00263g
Name
(RefSeq) Polyadenylation factor subunit 2
  KO
K15542  polyadenylation factor subunit 2
Organism
yli  Yarrowia lipolytica
Pathway
yli03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    2905837 (YALI2_A00263g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yli03019]
    2905837 (YALI2_A00263g)
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     2905837 (YALI2_A00263g)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_SPT8 VPS8_N
Other DBs
NCBI-GeneID: 2905837
NCBI-ProteinID: XP_500163
UniProt: Q6CGP9 A0A1D8N594
LinkDB
Position
A:1807191..1808666
AA seq 491 aa
MYSTYQRPAGYQPRQQPQGEEDRRPAHRRTVDHGSAFGKWHLDRLSGRTIQPANMRSEQS
YIVDLLPPSAYTNINGSLRSTNPHITSVAATPAKFIQVALNKVRHPVYSATWTPDGRRLL
TGSMSGEFTLWNGMTFNFESIMQAHESGVRSLKYSHSGEWLLSGDHEGNVKFWQPSLNCV
NVIDKAHRESIRELAFAPSDHKFVTGSDDGLLKIWDFHESSNAESVLKGHGWDVKSVDWH
SELGLIVSGSKDNLIKLWDPRSAKNVNTFHGFKNTVMKTTFQPTGTKRLLAAGCRDRTCR
ILDLRMLNSGSSEAGPTAGTDMPTRGDRSMAVLRGHDSDVFSLTWHPTHANVVTSGTKTG
SIYTFNVDTTPAGGAYGPDSGILPVNTIPSAHDYCVSTLDYHPEGHVLCSGGLDRMTRFW
ARPRPGDPTSFRDKYYEPKEEGVSVKTLPGVNNATSRAGMARVEHVSTQHFNTAQPEVTD
DEPVSIPGFAR
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtacagcacctatcagcgaccagcagggtaccagccgcgccagcagccgcagggcgag
gaagatcgacgacctgcgcacagacggaccgttgaccatggctcggcgttcggcaagtgg
catttggaccggctgagtgggcgcacgatccaaccggccaacatgcgatcggaacagtcg
tatatcgtcgatctgctgcctccgtcggcctacaccaacatcaacgggtcgctgcggtcg
accaacccgcacattacgtccgtggcggccactccggccaagttcatccaggtggctctc
aacaaagtgcggcacccggtgtactcagccacctggacgcctgatggacgacgactcctc
acaggctccatgtccggcgagttcacgctgtggaacggtatgacgttcaatttcgagtca
atcatgcaggcgcacgagagcggagttcgatcgctcaagtactcgcactctggagaatgg
ctcttgtctggagaccatgaaggcaacgtcaagttctggcagccatcgctcaactgtgtt
aacgtgatcgacaaggcccaccgtgagtcgatcagagagctggcgtttgcgcccagtgac
cacaagtttgtcaccggatcggacgacggtctgctcaagatctgggacttccacgagagc
agtaacgccgagtcggtgctcaagggccacggctgggacgtcaagtcggtcgattggcac
tcggagctgggcctcattgtgtctggatcgaaagacaacctcatcaagctgtgggaccct
cgatccgccaaaaacgtcaacactttccacggcttcaaaaacaccgtcatgaaaaccacc
ttccagcccactggtaccaaacggcttctggctgcaggatgccgggaccgaacatgccga
attctcgatctgagaatgctcaactcgggctcgtcggaagcaggaccaacagcaggaaca
gacatgcccaccagaggagatcggtccatggccgtgcttcgagggcacgattcggacgtg
ttttcgctcacatggcaccccacacacgccaacgtggtcacctcgggcaccaaaacaggc
tccatctacaccttcaacgtcgacacaactcccgccggaggagcgtatggaccggactcg
ggaattctgcctgttaacaccatcccctcggcccacgactactgcgtttctactttggac
taccaccccgaaggccacgtgctttgttcgggaggtctcgaccgaatgactcgtttctgg
gcacgacctcggcccggagaccccacctccttcagagacaagtactacgaacccaaggag
gaaggcgtctcagtcaagacgctgcccggagtcaacaatgccaccagccgggccggcatg
gctcgtgtcgagcacgtgtctactcagcatttcaacactgcccagcccgaggtgaccgat
gacgagccggtctccattccgggttttgctagatag

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