Yarrowia lipolytica: 2905901
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Entry
2905901 CDS
T01033
Symbol
YALI2_A00435g
Name
(RefSeq) Protein AIR1
KO
K12597
protein AIR1/2
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2905901 (YALI2_A00435g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2905901 (YALI2_A00435g)
03016 Transfer RNA biogenesis [BR:
yli03016
]
2905901 (YALI2_A00435g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
2905901 (YALI2_A00435g)
Transfer RNA biogenesis [BR:
yli03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
2905901 (YALI2_A00435g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-C2H2_10
AIR2-like_ZnK4
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
2905901
NCBI-ProteinID:
XP_500158
UniProt:
A0A1H6Q1X0
Q6CGQ4
LinkDB
All DBs
Position
A:complement(1797934..1798989)
Genome browser
AA seq
351 aa
AA seq
DB search
MSSDEDVSDLFFMDTEASAPAYTVLEDSDTEKPSKTPVEAFQSVGVDDVDDGEDQLIEMR
GEGRYFGKEEEQGPTCRTCHKRGHISADCKVMRCFTCGALEDHDTADCTMLRKCSNCGES
GHLRAECTQSKRTIFCWRCDSRIHTEDKCHLIWRDYVKDRRGPHGTNCVFCYHCGGQGHY
GDECTDTRNMTLRFKEPSAFSGGNLPRKGRYDIQKRYFDDLEREKNRGHNSYGGSYGGSY
GNSYNNQGSRGNEGQNSGFGGGRDARREKRERERQESKKRRKAEKRGGGQGGGLPRPQSS
GYIPPKSQYGPVAKNDYSFQPKLKQDHDHSDMFNRNRMDMPQPTRSGHYSK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgacgaagacgtgtctgacctgttcttcatggacacagaggccagtgcgcct
gcatacaccgttttagaagactcggacacggaaaaacccagcaaaacccccgtggaggcg
ttccagtccgtgggggtggacgacgtggatgatggggaagatcagctcattgaaatgaga
ggcgagggccggtatttcggtaaggaggaggagcaaggacccacgtgtcggacgtgtcac
aagcgaggccacatttcggcggactgcaaggtgatgcgatgtttcacctgtggagctctg
gaggaccatgataccgccgactgcaccatgttacgcaaatgctccaactgtggcgagtcg
ggccatctacgagccgagtgcacacaaagcaagcgcacgattttctgctggcggtgcgat
tcacgcatccacaccgaggacaagtgccatttgatctggcgagactatgtcaaggaccga
cggggcccccacggcaccaactgcgtcttttgctaccattgcggcggtcagggacattac
ggtgacgagtgcacagatacccgcaacatgacgttgcgattcaaggagccgtcggcgttt
tccggcggcaatttgcccagaaagggccgctatgatatccagaaacggtactttgacgat
ctggagcgggagaagaacaggggacacaacagctacggcggcagttacggcggcagttac
ggcaacagctataacaatcaaggtagccgagggaatgagggccagaacagcgggtttggt
ggtggacgagatgcgcgaagggagaaacgggagcgggaacgacaggagagcaaaaagcga
cgcaaggccgaaaagcgaggtggaggacagggtggagggttgccacgtccgcagtcgtcg
ggatacattccgcccaagtcgcagtacggtcctgtggccaagaatgactacagtttccag
cccaagctgaagcaggaccacgaccattcggacatgtttaaccgcaaccggatggatatg
ccccagcccactagatcggggcattacagcaagtag
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