KEGG   Yarrowia lipolytica: 2905947
Entry
2905947           CDS       T01033                                 
Symbol
YALI2_A00604g
Name
(RefSeq) Small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
yli  Yarrowia lipolytica
Pathway
yli03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2905947 (YALI2_A00604g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yli03019]
    2905947 (YALI2_A00604g)
   03041 Spliceosome [BR:yli03041]
    2905947 (YALI2_A00604g)
   03032 DNA replication proteins [BR:yli03032]
    2905947 (YALI2_A00604g)
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     2905947 (YALI2_A00604g)
Spliceosome [BR:yli03041]
 Complex A
  U1 snRNP components
   Sm proteins
    2905947 (YALI2_A00604g)
  U2 snRNP components
    2905947 (YALI2_A00604g)
 Complex B
  U1 snRNP components
    2905947 (YALI2_A00604g)
  U4/U6.U5 tri-snRNP components
    2905947 (YALI2_A00604g)
 Complex C
  U2 snRNP components
    2905947 (YALI2_A00604g)
DNA replication proteins [BR:yli03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     2905947 (YALI2_A00604g)
SSDB
Motif
Pfam: LSM ART-PolyVal RimP_C SM-ATX
Other DBs
NCBI-GeneID: 2905947
NCBI-ProteinID: XP_499786
UniProt: A0A1D8N3T9 Q6CHS5
LinkDB
Position
A:complement(join(589256..589564,590253..590255))
AA seq 103 aa
MSTPFNPTNPKPFLQELTGKSVIVHLKWGKTEYQGTLVSVDSYMNLQLEDAVEYVDQENK
GELGDVFIRCNNVLWIGENGVKEETKSATAEVTEEVKEDVEMA
NT seq 312 nt   +upstreamnt  +downstreamnt
atgtcaacccctttcaatcccaccaaccccaaaccgtttctgcaagaactcacaggcaag
tccgtcattgtccacctcaagtggggcaagaccgagtaccagggcacacttgtttccgtc
gacagttatatgaacctgcagctggaggatgcagtggagtatgtcgaccaggagaacaag
ggcgagctaggcgacgttttcatcagatgcaacaacgtactgtggatcggagagaacggg
gtaaaggaggagaccaagagcgcaaccgcagaggtgaccgaagaggtcaaggaggacgtt
gagatggcttaa

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