Yarrowia lipolytica: 2906155 Help Entry 2906155           CDS       T01033                                  Symbol YALI2_A00184g Name (RefSeq) Antiviral helicase SKI2   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism yli  Yarrowia lipolytica Pathway yli03018   RNA degradation Brite KEGG Orthology (KO) [BR:yli00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     2906155 (YALI2_A00184g)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:yli03019]     2906155 (YALI2_A00184g) Enzymes [BR:yli01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      2906155 (YALI2_A00184g) Messenger RNA biogenesis [BR:yli03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      2906155 (YALI2_A00184g)   mRNA degradation factors    3'-5' decay     Ski complex      2906155 (YALI2_A00184g) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD Ski2_beta-barrel DEXQc_Suv3 Helicase_C MTR4_beta-barrel ResIII MTR4-like_stalk Motif Other DBs NCBI-GeneID:  2906155 NCBI-ProteinID:  XP_499995 UniProt:  Q6CH67 A0A1D8N4H3 LinkDB All DBs Position A:1252305..1256087 Genome browser AA seq 1260 aa AA seqDB search MIDDILAEIRTKTGSTNATDPSGHSYNASAVSTWSRSPATDAESRDQLQATFLDPKPQFS NQWLRYISDDLSVVKTGFVESLYGVPEATNRSDVRFTRKGMRGHISGYEEFTTSGDILNS KNSFAVNRATGSRLDFVRGRSGFMPFAPGGVELAEKEEQSNLLHRDADGLFDVPPGFERG MNTATAVASADAELGELAVKESSEETGGDPGLVGDLSSQISSMQLAEDVSKHPIDDLLPN DITFGRAQTAVAQAAKQKDWAHVVNVNKEITNFSELVPQPAREFPFELDTFQKEAVYHLE QGDSVFVAAHTSAGKTVIAEYAIAMAQRNMTKAIYTSPIKALSNQKFRDFKSEFDDVGIL TGDVQINAEASSLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDADRGVVWEEVIIM LPEHVKFILLSATVPNTFEFANWVGRTKQKDIYVISTPKRPVPLVHYLLCKNEMVEIVDE HKKFLDQGYKQAVEIMEGDDGKAKGKGGGRGGRGGRGGRGGRGGSPPTGPLSDRGGRGGG RGGRGGKGGGDGGGRGGRGGGNGGGGGKGGFSRGPPPPTKQAFIQMVKMLHEKELHPMCT FVFSRKMCEQFAGYLSGLDFCNKREKAEIHMFFDKAVTRLSQVDRNLPQILQMREYLSRG IAVHHAGLLPIVKEVVEILFARSLVRVLFATETFAMGLNLPTRTVVFAGCRKHDGTTFRA LLPGEYTQMAGRAGRRGLDKTGTVIIMASGEVTPEEDLKEMMLGQPTKLQSQFRLTYNMI LNLLRIEALKVEEMIKRSFSENANQLMLPEHEASVKSHEDLLLNLKKKNYDDCDQFMPTI LELGLEQQTCLKFIIEQGPKIENMRDILKIGRVVIFKNPTGALRIGFLARSVIGESASIL MFPCDISSSKAKMAATLPMFPQVAGYNKFLLAPLAPISTKLEAASVPVSTIVFLSKYIIN NVSGVSRFDRQAVEQAYKSIQQICTRRGPVHECSFDKLKKLDLTEKCRDKLAMSVEFSKI PCIKKLSKNFLRAYTQEYEEYQLKETIANLRKSLNDENLELLPDYEQRVEVLKDLNYVDT NNIVLLKGRVACEVNSGFELFISELVMDNFLGDYEPEEIVALLSAFVYEGSRDVEEPVSV TPRLDKGRERIKELVANVMDVLEKRQVIMTSDEQQFLERGRFGLIEVVYEWARGMTFEAI SELTSAQEGIIVRVVSRLDEVCREVKSAARIIGDATLQEKMDVAQEKIKRDIIFCASLYL NT seq 3783 nt NT seq  +upstreamnt  +downstreamnt atgattgacgatattctggccgaaatccggaccaaaacagggtctaccaacgccaccgac ccatctggccacagctacaacgcgtctgcggtctcgacgtggtccagatcacccgcgact gacgccgagtctcgagatcagctgcaggccacgtttctggaccccaagccgcagttttcc aaccaatggctgcggtacatttccgacgatctgtcggtggtcaagacgggctttgtggag tctctttacggcgttcctgaggccacaaaccggtcggacgtccgattcactcgaaagggg atgcggggccatatcagtggctacgaggagttcacgactagcggcgacattctcaactcg aaaaactcgtttgccgtgaaccgggcaaccggatcgcgactcgatttcgtgcggggtcga tcgggattcatgccgttcgcgcccggaggagtggagctggccgagaaggaggagcagagt aacctgctgcacagagacgccgacggcctgtttgacgtgcccccgggctttgagcggggt atgaacacagccacggcggttgcttctgcggacgctgagctcggagagctggctgtgaag gagtcgtcggaagaaacaggaggagaccccgggctcgtgggcgacctgtcgtcgcagatc tcgagtatgcagctggcggaggacgtctccaaacacccgatcgacgatctgctgcccaat gatatcacttttggacgggctcaaactgccgtggcccaggcggccaagcagaaggactgg gcacatgtggtgaacgtgaacaaggaaatcaccaacttctccgaactggtgccccagcca gcccgtgagttcccttttgagctggacacatttcaaaaggaggctgtttaccatctcgaa cagggcgactctgtgtttgtggcggctcatacgtcggctggaaagaccgtgattgccgag tacgccattgccatggcccagagaaacatgaccaaggccatctacacctcccctatcaag gcgctgtccaatcagaagttccgagacttcaaatctgaatttgacgacgtgggtattctt actggagatgttcagatcaacgccgaggcgtcttctctgatcatgacgaccgagattctg cgttcgatgctctaccgaggcgctgatctcattcgagacgtggagtttgtgatttttgac gaagtccattacgttaatgacgcagaccggggagtcgtatgggaagaagtcatcatcatg cttcccgagcacgtcaagtttattctgctatctgccaccgtccccaacacgttcgaattt gccaactgggtcggtcgaacaaagcagaaggacatctacgtgattagtacgcccaagcgt cctgttcccctggtacattatcttctctgcaagaacgagatggtcgagattgttgacgag cacaagaaatttctcgaccagggatacaagcaagctgtggagattatggagggtgatgat ggtaaggcgaagggtaaagggggtggaaggggaggtcgtggaggacgaggtggacgtggt ggacgaggggggagccctccaactggtcctctctcggaccgaggaggtagaggaggtggc cgaggtggaagaggaggtaaaggtggtggtgacggaggaggaagaggtggccgtggcggt ggaaatggagggggtggaggaaaaggaggattctctcggggtcctccccctcccactaag caagctttcattcagatggtcaagatgttgcatgagaaagagctgcatcccatgtgtacg ttcgtcttctcgcgaaagatgtgtgagcagtttgccggatatctttctggtctggatttc tgtaacaagcgcgagaaggctgagattcacatgttcttcgataaggctgtgacgcgacta tctcaggtggaccgaaacctgcctcagattttgcagatgcgggagtacctgtctcgaggc attgctgtgcatcacgccggtctgctgcctattgtcaaggaggtggttgaaattctgttt gctcgatcacttgttcgagttttgtttgccacagagacgtttgccatgggtctcaatttg cccacacgaacggtagtgtttgctgggtgccgaaaacacgatggaaccaccttccgggct cttcttcctggagagtacacgcagatggccggccgagctggtcgtcgaggtctcgacaag actggtaccgtcatcatcatggcgtccggagaagttactcccgaggaggacctcaaggag atgatgcttggtcagcccaccaaactgcagtcgcagttccgactaacctacaacatgatt ctcaacttgttgcgaatcgaggccttgaaggtcgaggagatgatcaaacggtccttctct gagaacgccaaccagttgatgcttcccgagcacgaagccagtgtgaagagccacgaggat ctgcttctcaatctcaagaagaagaattatgacgattgcgatcagttcatgcccactatt ctcgagcttggtcttgagcagcagacgtgtctcaagttcattattgagcagggtcccaaa attgaaaacatgcgtgatattctcaagattggtcgagttgtcattttcaaaaaccccacc ggcgctctgcgaatcggttttctggcccgttccgttattggtgaatctgcctccattctc atgttcccttgtgacatttcttcttccaaggccaagatggcagccacactccccatgttc cctcaggtggcgggctacaacaagtttctgctggctcccctggctcccatttcgacaaag ctagaagcagcttctgttcccgtgtccaccatcgtcttcctctccaagtacatcatcaat aatgtctcgggcgtgtctcggtttgatcgtcaggctgttgagcaggcgtacaagagtatc caacagatttgtacgcgtcgaggacccgttcacgagtgcagtttcgacaagctgaagaaa ctggatctcactgaaaaatgccgcgacaagctggccatgtcggtcgagttttccaagatt ccctgcatcaagaaactcagtaaaaacttcctccgtgcttacacccaggagtacgaggag tatcaattgaaggagacgattgcaaatcttcgaaagtcgttgaacgacgagaacctggag ctgcttcctgactatgagcagcgagtcgaggtgctcaaggatctcaactacgtcgataca aacaacattgtgttgttgaagggccgggttgcgtgcgaagtcaactctggttttgagctg ttcatttccgagctggtgatggacaactttttgggcgattacgagcccgaggagattgtg gccctgttgtctgcatttgtctacgagggctctcgggatgtggaggagcctgtttctgtc accccccggcttgacaagggtcgagagagaatcaaggagctggtggccaacgtcatggat gtgcttgagaagcgtcaggtgattatgacatcggacgagcagcagtttttggaacgtggg cggtttggactcattgaggtggtgtacgagtgggcacgtggcatgactttcgaggccatt tccgaactaacttctgcccaggagggtatcattgtgcgagttgtgtctcgtctcgatgag gtttgtcgagaagtcaagtctgccgcgcggatcattggagatgctactttgcaggagaag atggatgttgctcaggagaagatcaagcgggacattattttctgtgcctctttgtatttg tag

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