Yarrowia lipolytica: 2906218
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Entry
2906218 CDS
T01033
Symbol
YALI2_A00095g
Name
(RefSeq) Exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2906218 (YALI2_A00095g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2906218 (YALI2_A00095g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
2906218 (YALI2_A00095g)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
2906218 (YALI2_A00095g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
2906218
NCBI-ProteinID:
XP_499797
UniProt:
A0A1H6PXC1
Q6CHR4
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All DBs
Position
A:622507..623364
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AA seq
285 aa
AA seq
DB search
MIPGFVTPGILISLVVDRDGNKFYPGIGTAVRVVEGSEAKVAGKSQAKAIVATATGKVVL
SERQESAEHNDKSRDTKGSCYTVNIVKKTKGDDSSSTTPTTSHVSPSASSGLPKVGDYIL
ARVSKLTSKQANVEILVVEGQGGVGQDAGLGLNGNENGIHSNPLSNAGSLVEGAIRSDLG
EGFGGIIRSIDVRATERDKVKMELCFKPGDIVRAQVISLGDGANYYLSTAKNELGVLFAR
SKIGELMYATDWQTMACPVTGLTEERKCASPYKQEVKAEVKEEAK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatccccggattcgttacacctggaattttaatatctctcgttgtcgaccgagacggc
aacaagttttaccccggaatcggcacggctgttcgagttgtggaaggttccgaggccaag
gttgctggcaagtcgcaggccaaggccattgtcgccacagctacgggaaaggtggtgctg
agcgaacgacaggagagcgcggagcacaacgacaagtcacgtgataccaagggctcatgc
tacacggtcaacattgtgaagaagaccaagggtgacgattcatcttcaactacacctact
acatcccatgtgtcgccctcggcttcgtcgggactgcccaaggttggcgattacattctt
gcacgagtttcaaagctcacgtcgaaacaggccaacgtggagattctggtggtggagggc
cagggaggagtgggccaggacgcgggtttgggactcaatggcaacgagaacggtatccac
agcaaccctctgtcaaatgcgggctctttggtggaaggcgctattcgatcagatctcggt
gagggcttcggtggtatcattcggtccattgatgtgcgagccaccgagcgagacaaggtc
aaaatggagctgtgtttcaagcccggtgatatcgtgcgagcacaggtcatttctctcgga
gatggtgccaactactacctttctacagccaagaacgagctcggagttctgttcgctcga
tcgaaaatcggagagttgatgtacgctaccgactggcagaccatggcctgtcctgtgact
ggcctgacggaagagagaaagtgcgcttctccttataagcaggaggtcaaggctgaggtc
aaagaggaggccaagtag
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