Yarrowia lipolytica: 2906372
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Entry
2906372 CDS
T01033
Symbol
YALI2_A00657g
Name
(RefSeq) Putative replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
yli
Yarrowia lipolytica
Pathway
yli03030
DNA replication
yli03410
Base excision repair
yli03420
Nucleotide excision repair
yli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2906372 (YALI2_A00657g)
03410 Base excision repair
2906372 (YALI2_A00657g)
03420 Nucleotide excision repair
2906372 (YALI2_A00657g)
03430 Mismatch repair
2906372 (YALI2_A00657g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yli03032
]
2906372 (YALI2_A00657g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2906372 (YALI2_A00657g)
03400 DNA repair and recombination proteins [BR:
yli03400
]
2906372 (YALI2_A00657g)
DNA replication proteins [BR:
yli03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
2906372 (YALI2_A00657g)
DNA Replication Termination Factors
ELG1-RFC complex
2906372 (YALI2_A00657g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
2906372 (YALI2_A00657g)
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
2906372 (YALI2_A00657g)
Check point factors
HRAD17(Rad24)-RFC complex
2906372 (YALI2_A00657g)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_assoc_2
RCF1-5-like_lid
AAA_22
AAA_30
RuvB_N
AAA_11
AAA_24
AAA_16
AAA_5
AAA_7
DEAD
AAA_14
ResIII
AAA_19
AAA_2
Mg_chelatase
DUF815
AAA_28
SLFN-g3_helicase
ABC_tran
bpMoxR
ATPase_2
nSTAND3
TK
DNAX_ATPase_lid
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
2906372
NCBI-ProteinID:
XP_499674
UniProt:
Q6CI37
LinkDB
All DBs
Position
A:complement(286254..287330)
Genome browser
AA seq
358 aa
AA seq
DB search
MSANMEGFEESRKGKEIAVDTIKPGKDHLPWVEKYRPDTLDDVTGHEGVVTTLKKLLANK
KFPHLLFYGPPGTGKTSTILAVAREIYGPSYKSMVLELNASDDRGIDVVRDQIKVFASSR
QIFQRGGEENARSNFKLVILDEADAMTNVAQNALRRVIEQYTTHTRFCILANYTHKLNPA
LLSRCTRFRFSPLPEAAIDKRIMQVIDAEKVKIAPDAKAALLELSKGDMRRALNVLQACH
TGLEHPGKDTITLSQVYLCVGSPDPADIDTILTSILNDDWTTAYDTVSTLKRERGLALVD
ILEKLSAELMALNLKEKTKIALLSKLADIEYRLANGGSEKIQTSAAIGVIKDSMELEV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaacatggagggattcgaggaatcgcgaaagggcaaggaaattgctgtcgac
accatcaagcccggaaaggatcatctgccctgggtcgaaaagtaccgacccgacactctg
gacgatgttacaggccacgagggagtagtgaccacgctcaaaaagttgctggccaacaaa
aagttcccgcatctgctgttttacggtcctcccggtaccggaaaaacgtccaccattctt
gcggtggcgcgagagatctacggacccagctacaagagcatggtgctggagctcaacgcg
tccgacgacagaggaatcgacgtggtgcgagaccagatcaaggtgtttgccagctcgcgg
cagattttccagcgtggtggcgaagagaatgcgcgatccaacttcaaactggtcattctg
gacgaggcagatgccatgaccaacgtggctcagaacgccctgcgacgagtcattgagcag
tacaccacccatacccgattttgcattctcgccaactacacacacaagctgaaccccgcg
ctgctatcgcgatgcacacggttccgattcagccctttgcccgaggcagccatcgacaaa
cgaatcatgcaggtcattgacgcggaaaaggtcaagattgcgcccgacgccaaggcagcg
ctgctggagctgtccaagggagacatgagacgggctctcaacgtgctgcaggcgtgccac
acgggtctggagcaccctggaaaggacacaatcactctttcacaagtatacttgtgtgtt
gggtcgcctgacccagcagacattgacaccattctgacttcgatcctgaacgacgactgg
accacagcttacgacaccgtttccactctgaaacgagaacgaggtctggcactggtggac
attctggagaagctgtccgccgaactgatggcactcaatctgaaggagaagaccaagatt
gcactcttgtccaagcttgccgacattgagtaccggttggccaacggaggctccgagaag
atccagaccagtgctgccatcggtgttattaaggactctatggagttggaggtttaa
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integrated database retrieval system
