Yarrowia lipolytica: 2906382
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Entry
2906382 CDS
T01033
Symbol
YALI2_A00546g
Name
(RefSeq) DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
yli
Yarrowia lipolytica
Pathway
yli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
2906382 (YALI2_A00546g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yli03400
]
2906382 (YALI2_A00546g)
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
2906382 (YALI2_A00546g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
2906382
NCBI-ProteinID:
XP_499916
UniProt:
Q6CHE5
A0A1D8N489
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Position
A:complement(981783..984755)
Genome browser
AA seq
990 aa
AA seq
DB search
MKRSKQATLSRFFKKPKTGADAVHTEAVIGKKPTDSGSPAEQKDAKSPQQVTDEPPLEPV
TVTTDVVAMDTQPDLSIGSEINSKSRPKSLASFKSGKSINTDHNPELKQKFRAKLELVRN
KNDEDLPVITKKTKLNATEFQWYEIKKQHRDTLLFVQVGYKYHIYGDDAEIAHAQTRLFL
SPGITNLKDIGNDGVVQQGSKYIKLAYSSFPVHRIDFYTKQLVEKGFKVGHVQQMEVAAL
KNVENKKGPMIRELTNTFTKGTYIESGNGGSVNDVQYSSYLVALHESKGDKPTVTLLATE
VSTGDVIWDSFNDDYVKSELEIRLLTLAPCEILNCGVSSSTLKMCQKYMHRNKGRLAEMN
VLEEEVEDPDAQVALFFEGKANAGTCSTVLELPAMVKTLILATSRYLTHCKLDSLFLLTN
NFTRYAGSYMRLSANTVASLELFANTTDHTAKGSLFWVLNRCLTVFGSRELKKWVSRPLT
DRTAILQRLSAVEAIIKSIYGAESDELTTLINKLVKLLKPIPDLSKMLMRLHYGQLNRKE
VYLLLRELLFVAQEFKPGSGDKYIDTNPVLGEIFNSLGIHVSDIEKLLEEINPDAARQDE
ALTFFVTDPPSLVDRKKDLKKVEAELQIELLALRAELNRPKLQYSSVAGIDYLIEVANKD
TKKLPLEWTKISGTKSVSRFRTPTLNSLVKRHEYCVEKLKAACDIEFNMFRSRCATHYEF
FRSMVVAMSQFDCLFALAKVSGQSGWVKADYVDEGGIDLKDSRHVITEKLMTNYISNDIK
IRCPTVVTGPNMGGKSSLVRQIALSVLLAHIGCYVPASKAQIPITDSILCRMGAQDNIMS
GQSTFMVELCECAEILRNATSKSLVLLDEIGRGTTTTDGIAIAHSVLKHFIELEALTLFI
THYPLGQLLDSEDSNKCDLVHMDITNTNPPIFTYKMKPGSATDSYGLNVAGLAGIPQAII
NRAEEMGKDMKHDVMYQEGVRMLTDIKKVM
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatcgaaacaagcgacactgagtcgatttttcaagaagcccaaaacaggggcc
gacgctgtgcacaccgaagcggtgatcggcaaaaaacctacagactctggttctccagct
gagcaaaaggacgccaaatcacctcagcaagtcacagatgagccgcccctggagccggtg
acagtaacgacagacgtcgttgccatggacacgcagcctgatttatcaattggatctgaa
atcaactccaagtctcgtccaaaatccttggcgagtttcaagagcggcaagtcaattaac
actgatcacaaccctgagctcaagcagaagttcagagcgaagctcgagctagttagaaac
aagaatgatgaagacttgccagtgattacgaaaaagacgaagctgaacgctacagagttc
cagtggtacgaaatcaagaagcagcatcgagacacattgttgtttgtgcaggtgggctac
aaataccatatctacggcgatgacgcagaaattgctcacgcccaaacacgcctattcctc
agtccaggtatcacaaacctgaaggatatcggaaacgatggagtagtccaacaaggcagc
aagtacatcaagctagcctactcctcgtttccagtgcacagaatcgacttttacacgaaa
caactggttgagaagggattcaaggtgggccatgtgcagcagatggaggtggcagcattg
aagaatgttgagaacaaaaagggacctatgatcagagaactcaccaacacgttcactaag
ggaacatatatcgagagtggaaatgggggcagtgtgaatgatgtgcagtactcctcgtac
ttagtggcattgcacgagagcaagggggacaagcctactgtcacattgctcgctacggag
gtgtctactggtgacgtcatctgggactcgttcaatgatgactacgtaaagtccgaactc
gagataaggcttttgacgttagcaccatgcgaaattttgaactgcggcgttagctcgagt
acgctcaaaatgtgccagaagtatatgcatcggaacaagggtcgactggctgagatgaat
gttcttgaggaggaagtggaagatccagatgcccaggtcgcactgttctttgagggaaaa
gcaaatgcaggtacttgttctactgttctggaactacccgccatggtgaaaacactgatc
ctcgctacttcgcgctaccttacccattgtaagctcgactcactctttttgttgacaaac
aacttcactagatacgcaggcagctacatgcgcctctcggccaatacagtggcatccttg
gagctgtttgctaataccacagatcacacagctaagggttcattattctgggttctgaac
agatgtcttactgttttcggcagccgtgagctcaagaagtgggtatcgcggcctcttacc
gacagaactgcgattcttcaacgacttagtgcggtggaagctatcatcaaaagcatatat
ggagctgaatcagacgagctgaccacgttgatcaacaagttggtgaagctcctcaaacct
attcctgaccttagcaagatgctcatgagactccactacggtcagctcaacagaaaggag
gtgtatttactgcttcgggaactgttgtttgttgcccaagagttcaagcctggcagtggc
gacaagtacatcgacaccaaccctgtgttaggtgaaatttttaattctctgggtattcac
gtgagtgatattgagaaacttctggaggagattaaccctgatgcagcgcgacaagacgag
gctctcacgttctttgtgaccgaccccccgagcttggtagatcgcaagaaagaccttaag
aaagtggaagccgagcttcaaattgagttgcttgcactccgagcggaactcaaccgcccc
aagctgcaatactcttccgtggctggtattgattacttgattgaagttgcaaacaaggac
accaagaagctacctcttgaatggacgaagattagtggcacaaagtctgtgtcacgattc
aggacacccacgctcaacagtctagttaagaggcacgaatactgcgtggagaaactcaag
gctgcctgcgatatcgagttcaacatgttccggtcgcggtgtgccacccactatgagttc
ttcagatctatggttgtagccatgtctcaattcgactgcctatttgcattggctaaggtc
agtggacagtcggggtgggtcaaggcagactacgtcgacgaaggtggtattgacttgaag
gattcccgccacgtaatcaccgagaagctgatgaccaattacatctccaatgacatcaaa
attagatgccctaccgtcgttacaggccctaacatgggaggtaagtcaagtttggtccga
cagatcgctctatcagttctcctggcacatatcgggtgctacgtgcctgcctcgaaggcc
cagattcctatcacagactctatcctgtgtcgtatgggggctcaggataacattatgagt
ggccaatctaccttcatggtggagttgtgtgaatgtgcagagattctcaggaatgctacc
agcaaatctctagtattactggatgagattggccgaggaaccaccactacagatggtatc
gcgattgctcattctgtactgaaacatttcatcgagcttgaagcattgacattatttatt
actcattatcccctaggtcagttgcttgatagtgaagatagcaataagtgcgacctcgtg
cacatggatattaccaacaccaaccctcccattttcacatacaagatgaagcctggcagt
gccacagacagctatggtctaaacgtggctggactagctggtattccccaagctatcatc
aacagagccgaagaaatgggcaaagatatgaagcacgatgttatgtatcaggaaggagtg
agaatgctcactgatatcaaaaaggtgatgtga
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