Yarrowia lipolytica: 2906807
Help
Entry
2906807 CDS
T01033
Symbol
YALI2_C00802g
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
yli
Yarrowia lipolytica
Pathway
yli03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
2906807 (YALI2_C00802g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2906807 (YALI2_C00802g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2906807 (YALI2_C00802g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
2906807 (YALI2_C00802g)
Coactivators
SAGA/TFTC/STAGA complex
2906807 (YALI2_C00802g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
2906807 (YALI2_C00802g)
STAGA complex
2906807 (YALI2_C00802g)
TFTC complex
2906807 (YALI2_C00802g)
SAGA complex
2906807 (YALI2_C00802g)
SLIK complex
2906807 (YALI2_C00802g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
LisH
Beta-prop_Vps41
WD_LRWD1
VPS8_N
PROPPIN
NHase_beta_C
Motif
Other DBs
NCBI-GeneID:
2906807
NCBI-ProteinID:
XP_500875
UniProt:
A0A1H6PHY7
Q6CEN7
LinkDB
All DBs
Position
C:complement(2810266..2812491)
Genome browser
AA seq
741 aa
AA seq
DB search
MSQSPAPNPQGGINNGKPANGAAPGAAGTPNRPANGAQAGGASTPTNRPAQASGSDLNRI
VMEYLHKKGYFQTESMLRFESSRAPAPAQPVGSQYTGGQNATNVAPGATPPPPAPPGAPQ
VAIGTNNAGQMQQVPIPKPPVAKSIHDDTTAIRKGYVMLRNWTEASLDFYQPELRRALYP
IFVHCYLDIIAKGQASEARDFFATYSGDHAVLHGHDLQKLSGISLPDHIPSNELAQKFRS
SKYRLNISRTVFDLLFYFLQEHDSTGGAIILRIVNQYIDAQVSSGRPNRFDSEGAVHSSE
GLPDTAHGSQVDSFNQAEVKLGKLPYEASFEKEVEHSLREIDKGNTDGGNSLEAEFASMK
SDQDTAPNREMLPLPPHTSVDIAAEIQAVMDSRAKIKVGPVQAAMPSVCMYTFHNTHDGL
NCLDFSSDATLIAGGFSDSFVKVWSLNGSRLKSVVKGDTATTSKRLVGHAGPVYGVSFSP
DQRYLLSASADKTVMLWSMDTYTGLVCYKGHNEPVWDVAFSPHGHYFATASHDQTARLWS
CDHIYPLRIFAGHMSDVDCVIFHPNGTYVFTGSSDRTVRMWDVAKGSSVRVFIGHTAAIN
CLAVSPDGRWLASAGEDHVIILWEIGSGRRLKIMRGHGKASIYSLAFSREGTVLVSAGAD
QSIRVWDVKKSTVESGPEPENLSVERAPEAVSSAKGNEASKKREIVATPDHMAVYHTKSS
PVYKVQFTSRNLCLAGGAFNG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatctccggcacccaacccgcaaggcggcatcaacaacggcaagcccgccaac
ggcgctgctcctggggctgctggcactcccaacaggcctgccaacggcgctcaggctgga
ggtgcctcgacaccgacaaacagacctgctcaagcctcagggtcggacctcaaccgaatc
gtcatggagtacctgcacaaaaagggctatttccaaaccgaatccatgttgcggtttgag
tcatcacgtgcccctgctcctgcgcaacctgtgggctctcaatacaccggaggacagaac
gcgaccaatgtagcgcctggagcaacccctcctcctcctgcacctcccggagctccccaa
gtggccatcggaaccaacaacgccggccagatgcagcaggtgcccatccccaagcctccg
gtggccaaatcgatccacgacgacacgacagccattcgaaagggctacgtgatgctgcga
aactggacggaggcgtcattggacttttaccagcccgagctgcgacgtgcgctgtacccc
atttttgtgcactgctaccttgatattattgcaaaaggccaggcctctgaagctcgagac
ttcttcgccacatactcgggtgaccatgctgtgttgcatggccatgacctgcaaaagctg
tctggaatctcgctgcccgaccacattccttccaacgagctggcgcaaaaatttcgttcg
tccaaatacagactcaacatcagtagaaccgtgttcgatctactgttctactttctgcag
gaacatgactccactggcggagccatcattctgcgaatcgtcaaccagtacatcgatgca
caggtatcgtccggccggcccaaccgattcgactcagagggtgcagtgcattcgtcagag
ggactgcccgataccgcacatggatcccaggtggactcgtttaatcaggccgaggttaag
ttgggcaagctgccgtacgaagcatcatttgaaaaggaggtggagcactcactgcgggaa
attgataagggtaataccgatggtggaaactcattagaggctgaatttgcgtccatgaag
tcggaccaggacacggcacccaaccgtgaaatgctgcctctaccccctcacacgagcgtg
gacattgcggccgaaattcaggccgtgatggactcgcgtgccaaaatcaaggtcggacct
gtgcaagccgccatgccctctgtgtgtatgtataccttccacaacacccacgatggactc
aactgtctggacttttcgtcggacgctaccctgatcgctggaggtttctccgactccttt
gtcaaggtgtggtcgctcaacggctctcgtctcaagtctgtcgtcaagggagacactgcc
accacctcgaagcggctggtgggacacgctgggccagtctatggagtcagcttctcgccc
gaccagagatatctgctttctgcatcggccgacaagacggtcatgctgtggagcatggac
acgtacacaggtctggtttgctacaagggccacaatgagccagtgtgggacgttgcattc
agcccacacggccactactttgccacagcctctcatgaccagaccgcgcggctgtggtcc
tgtgaccacatttaccctctgcgaatctttgcaggtcatatgtccgacgtggactgtgtc
attttccaccccaacggcacttatgtattcaccggctcgtccgaccgaaccgtgcgaatg
tgggatgtggccaagggctcgtcagtgcgtgttttcattggccacacagccgctatcaac
tgtctggcagtgtcaccagatggtcgatggctagcgtctgctggagaagatcacgtgatc
attctgtgggagattggatctggtcgacgtctgaaaatcatgcgtggacatggcaaggcg
tccatctactcactggcgttttccagggaaggaaccgtgctcgtgtctgctggtgcagac
cagagcatccgagtgtgggacgttaagaagagcactgtggagtctggacctgagcctgag
aacctgtcagttgaacgagccccagaggctgtatcttctgctaagggtaacgaggcatcc
aagaagcgggagattgtagcaacccccgatcatatggctgtctaccacactaagagcagc
ccggtttacaaggtgcagttcactagcaggaatctgtgtttggctggaggagccttcaat
ggttag
DBGET
integrated database retrieval system
