KEGG   Yarrowia lipolytica: 2906869
Entry
2906869           CDS       T01033                                 
Symbol
YALI2_C00374g
Name
(RefSeq) Poly(A) ribonuclease pop2
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
yli  Yarrowia lipolytica
Pathway
yli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    2906869 (YALI2_C00374g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yli03019]
    2906869 (YALI2_C00374g)
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     2906869 (YALI2_C00374g)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     2906869 (YALI2_C00374g)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 2906869
NCBI-ProteinID: XP_500803
UniProt: Q6CEV9 A0A1H6PI41
LinkDB
Position
C:2578935..2580326
AA seq 463 aa
MRANFIQPQQVHQGFVNGNAGPDPRMGMMGQAGGAQGVNGMMRSTATQNQGGQQAQNSTP
VRSAQQPGQQQQQQQPNSGQRPGSALGLNSTPGQQTGGQQQGFPGMVNPLPMGMRNPMMM
GQQGGVSGGRRGPGGAGGPPMMGAAQMQHLSQQQQQQQHPAPVREVWGFNLEEEMARVRE
VSERARYVSLECKFPGIVARPIGQFRSTNEYHYQTLRANVDLLKVIQVGLSFSDDSVAPP
VTWQFNFRFDETQDMCSEDIKDLLKQSGVDFVRHQQHGIDAFNFGELLISSGLVLDDGIE
WITFHAGYDLGYVLGIMLNKELPAEEQQFLAQVRRYFPRVWDLKNAVKNSGLTIRSNSLS
SLAEDLRVRDQEVTNNQAGADAKLAAECFFEMRRYLGDQMALEMANKLCGLSELHPEQLM
LLEEDEDAPGEDLTEVPVPTVQKPKEKQDGVNVFQFSKMGGGK
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgcgagcaaacttcatacagccccagcaagtccatcagggatttgtgaacggcaatgcc
ggccccgacccaaggatgggcatgatgggacaggcaggaggcgcccagggtgtcaacggc
atgatgcgatcgaccgcgacacagaaccagggtggccagcaggcacaaaacagcactcct
gttcgatctgcacaacagcccggccagcagcaacagcaacaacagcccaactcgggccaa
cgtcctggatctgcactcggtctcaactccacgcctggtcagcagaccggcggacagcag
cagggcttcccaggaatggttaacccacttcccatgggtatgcgtaacccgatgatgatg
ggtcagcagggtggagtctctggtggtcgacgaggccctgggggagcaggaggaccccca
atgatgggagccgcacagatgcagcatctttcacagcagcaacagcagcagcagcatccg
gctcccgtccgtgaggtatggggattcaacctggaggaggaaatggcgcgggtcagagag
gtgtctgaacgggctcggtatgtgtctctggagtgtaagttcccgggcattgtggcccgt
cccattggccaattccgttccacaaacgagtaccactaccagactctgcgtgccaacgtg
gatctgctcaaggtcatccaggtgggactgtcgttctcggacgactctgtagcccctccc
gtcacctggcagttcaacttccggttcgacgaaacccaggacatgtgttctgaagacatt
aaagatctgctgaagcagagcggagtggactttgtgcggcaccagcagcatggaatcgac
gccttcaactttggcgagctgctcatttcgtccggactggtcctggacgacggcatcgag
tggatcaccttccatgccggctacgatctgggctacgtgctcggaattatgctcaacaag
gagcttcctgccgaggaacaacaattcctggcccaggtacgacgatacttcccccgagtg
tgggatctcaagaacgcagtaaaaaacagcggccttacaatcagatccaactcgctgtca
tctctggccgaagacctgcgggtccgagaccaggaagtgaccaataaccaagccggagcc
gacgccaagctcgctgccgagtgcttctttgaaatgcgacgttacctaggcgaccagatg
gcgctggagatggccaacaagttgtgcggtctcagtgagcttcatcctgaacagctgatg
ctgttggaggaagatgaagacgcccctggagaggatctcaccgaagtgcccgtgcccacg
gtccagaagcccaaggagaagcaggatggagtcaacgtgttccaattctccaagatggga
gggggcaagtaa

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