Yarrowia lipolytica: 2906997
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Entry
2906997 CDS
T01033
Symbol
YALI2_B00604g
Name
(RefSeq) Nucleoporin NSP1
KO
K14306
nuclear pore complex protein Nup62
Organism
yli
Yarrowia lipolytica
Pathway
yli03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2906997 (YALI2_B00604g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2906997 (YALI2_B00604g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2906997 (YALI2_B00604g)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
EspB_PPE
HD_3
Miga
Motif
Other DBs
NCBI-GeneID:
2906997
NCBI-ProteinID:
XP_500434
UniProt:
A0A1D8N682
Q6CFX8
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Position
B:complement(663077..664672)
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AA seq
531 aa
AA seq
DB search
MSSGFSFGANTGKTGGGFNLGNNASSGTTGSGSTGFSFGAGNNNNTTTNNTNTSGGTGGL
FGGGAAAGGAAKPSLFSASGASGAGAGAGASSAPKFSFGATPSASTPAASSTAAPAASGG
LFGGGAASSKPSFGGFGAAKTDDKPAAPAASTGGFSFGAKPADAAAAPKPSFGGFGATKT
EDKPAAASTDSAAKPSFSFGGATKTEAPEPAATGGFSFGAKTEEKKDEAPKPAATGGFSF
GGAKTEEKKDDTAKPALSFGGATAGAPAAGTTAAGTTGTAAPAAPAAGGLFGAKKDDKKE
DGKTLPSLTAAPATSAASMASKTPVASAQPVSTSNLKNKSMEDIISKWTTELSTQSEEFR
QQAQDIMEWDKVLVDNGDKISDIYAKVIQTEQTQTKVDQLLQYVGKQQDDLESLLTGYEE
EASRLLGDLAGTDGLQPVDQERENAYNLAEDLGIKLESMGGNLSSVIEEVNKISNDINNF
HRDDALTQIVKILNSHLSSLQWIDSNTQSLEQNIEAIKLLEKQVNSRMYGR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggattctcgtttggagccaacactggtaaaactggcggaggattcaacctg
ggcaacaatgcctcttctggtaccaccggatcgggatccaccggcttctcgtttggagct
ggtaacaacaacaacacaaccacaaacaacaccaacacatccggaggcactggcggtctt
tttggaggaggtgccgcagctggaggagctgccaagccctcgttattcagtgcctctggc
gcttctggagctggagctggagctggagcgtcatctgctcccaagtttagtttcggtgcc
actccttctgcttctactcctgctgcatcgtcgactgccgcccctgcggcctctggaggt
ctgtttggaggaggagccgcttcttccaagccctcgtttggaggattcggtgctgctaag
accgacgataagcctgctgctcctgccgcatctactggaggattctcgtttggagccaag
cctgccgacgctgctgccgcgcctaagccttcctttggaggttttggggcaaccaagacg
gaagacaagcccgctgctgcttctactgactctgctgcaaagcccagcttcagctttgga
ggagccaccaagactgaggctcccgaacctgctgccaccggaggattttcttttggtgca
aaaaccgaagagaagaaggatgaagctcccaagcctgcagcaacgggcggtttctctttc
ggaggtgccaagactgaggagaagaaggatgatactgctaagcctgctctaagctttgga
ggagccaccgctggagctcccgccgccggtactactgccgctggcaccacaggtaccgct
gctcccgctgctcccgctgctggaggcctatttggagccaaaaaggacgataagaaggag
gacggaaagaccttgccttctttaactgctgctcctgccacctctgctgcttctatggct
tccaagacccccgtggcgtcggctcagcccgtgtccacctccaacctcaagaacaagtca
atggaagatatcatttccaagtggaccacagagctgtcaacccagtcggaagagttcaga
cagcaggctcaggatatcatggagtgggacaaggtgcttgtagacaacggcgacaagatc
tccgacatttatgccaaggtgatccagacagaacagacacagaccaaggtggaccaactg
ttgcagtacgtcggcaagcagcaggacgatctggagagcctgctaacaggttacgaggag
gaggcttctcgtctactgggcgatctggctggcactgatggtcttcagcccgtggaccag
gagcgtgagaacgcttacaaccttgctgaggatctgggtatcaagctggagagcatgggt
ggcaacctttcttctgtgattgaagaggtgaacaagatttccaacgacatcaacaacttc
catcgagatgatgctctgacccagattgtcaagattctcaactcccatctctcgtctctg
cagtggatcgactccaacacccagagtttggagcagaatattgaggccatcaagctgctg
gagaagcaggtcaactctcgaatgtacggtagatag
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