Yarrowia lipolytica: 2907145
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Entry
2907145 CDS
T01033
Symbol
YALI2_B00005g
Name
(RefSeq) RNA polymerase II subunit B1 CTD phosphatase RTR1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
yli01009
]
2907145 (YALI2_B00005g)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2907145 (YALI2_B00005g)
Enzymes [BR:
yli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
2907145 (YALI2_B00005g)
Protein phosphatases and associated proteins [BR:
yli01009
]
HAD phosphatases
Fcp/Scp phosphatases
2907145 (YALI2_B00005g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
2907145 (YALI2_B00005g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
SLATT_6
Motif
Other DBs
NCBI-GeneID:
2907145
NCBI-ProteinID:
XP_500341
UniProt:
A0A1D8N5S4
Q6CG71
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All DBs
Position
B:269767..270516
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AA seq
249 aa
AA seq
DB search
MLQLREEIEKLRTRFGNTGSEPPNLQLSALITIAVIEALSAKKTDIQTFKYASRYLTPEV
YDELVGERTYEHICGYPPCGLVPKSASGKNKILGTLAQNQKFDVPWAYLRTFCSKQHYQA
SQFYRAQLSSDPLDLRGSIWGDYGSCKQYEGSIILLEELTSDAQQGKSMAEIVEGFTQMS
LKDPELARMNIPANGDEITKLGKEIQEISLREREDDENDVEPDYESLEDMSSKDKASAIE
GYKPRIQWR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaactacgcgaggaaatcgaaaagctacgaactcggtttggaaacacggggtct
gagccgccaaacctgcagctttctgcactcatcacgatcgccgtgatcgaggctctgtcg
gcgaagaaaaccgacatccagaccttcaagtacgcgtcgcgatacctcacccccgaggtg
tacgacgagctggttggcgaacgcacttacgaacacatctgcgggtaccctccgtgcgga
ctggtgcccaagtctgcgtcgggcaaaaacaagattctcggcacgctggcccagaaccaa
aagtttgacgtgccgtgggcgtatctgcggaccttttgcagcaagcagcactaccaggcg
agccagttttatcgtgcacagctgtcgtcggaccctctggacctgcgaggcagcatctgg
ggcgactatggctcgtgcaaacagtacgagggcagcatcatcctgctggaggaactgacg
tcggacgcccagcagggcaaatccatggctgagattgtggaggggttcacgcagatgtcg
ctcaaggaccccgagctcgctaggatgaacattcctgccaacggagacgagatcaccaag
ctgggcaaggagatccaggagatttcgctgagagagcgcgaggacgacgagaatgacgtg
gagccagactacgagtcgttggaggacatgagtagtaaggataaggccagtgctattgag
ggctataagccgagaatccagtggagatag
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integrated database retrieval system
