Yarrowia lipolytica: 2907288
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Entry
2907288 CDS
T01033
Symbol
YALI2_C00664g
Name
(RefSeq) U2 snRNP component prp10
KO
K12828
splicing factor 3B subunit 1
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2907288 (YALI2_C00664g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yli03041
]
2907288 (YALI2_C00664g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2907288 (YALI2_C00664g)
Spliceosome [BR:
yli03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
2907288 (YALI2_C00664g)
Complex B
2907288 (YALI2_C00664g)
Complex C
U2 SnRNP specific factors
2907288 (YALI2_C00664g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
2907288 (YALI2_C00664g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT_EZ
TOR1L1_N
HEAT
HEAT_EF3_N
HEAT_2
HEAT_ECM29
SF3b1
Adaptin_N
Htt_N-HEAT_1
RRP12_HEAT
CLASP_N
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
2907288
NCBI-ProteinID:
XP_501149
UniProt:
Q6CDW3
A0A1D8N8N1
LinkDB
All DBs
Position
C:complement(3637772..3641113)
Genome browser
AA seq
1113 aa
AA seq
DB search
MDEIKRLREDRQKPFFEDDDAVMADVSEMQALNDDERQNLPQDSYTAPQEFLNETVSLQA
VDELQANESNKSIYNRANDYKRKRLDRQEADDDEKDLSYKERLALRDLERDEKRVQEAIR
KKEEANGTSQKEQDELRKFERAQTPPRVGPRVRKGRSDKPVTEDSGERGRKRKSRWDVPD
EKEAETSTTSKITDEFLASVLPSEGYTVLTPPASYKPLIKSKVTVKIEGYSIPGGSTETA
VDRALAIQAAVPSADAIPGVGDLAYFKESDMKYFGALIKQQDAEEQGLLSAREMKERQVM
RLILKIKNGSPQMRKQAMRQLTDSARSLGPEALFSQIIPLFRERSLEDTERHWLVKVVDR
VLFKLGDLVRPYTPRLLSVIEPLLIDEDYFTRVEGRELVANISKAAGLPHMISTLRPNVG
HADEFVRNTTARSFAIVASSLGVPALVPFIKAVCKSKKSWEARHTGAKIVQQIAILIGCT
VLPYLGSLVDCIGDGLTDDNPKVRQMTAQALAALAEAAAPYGIESFENVLEPLWLGVREQ
RGKHLVAFLKAIGYIIPLMNPDYADYYTKEVMAVVLREFYSPDEEMKRVVLEVVTQCARS
EGVTARYIRVEVLPTYFKCFWTRRMASDRVCYKLILSTTVELANKVGTAEIVDRVANHLK
DESDHFRRLTMETIDKVVANLGIADIEAGSKLETRLVDGILTAFQLQSPAANANRADSIV
MLRGFGTVIQALDTRAAPYFSQITSSVLFRLSNKSPIVRSQAADLIGQIAGVMKNCGEDE
ALNKLGQILYEQLGEEYPEALGSLLGALKAIVAVVGLASMTPPIRDLLPRLTPILRNRHE
KVQENTIDLVGRIADRGPEYVSAREWMRICFELIDLLKAHKKTIQKAANNTFGYIAKAIG
PQDVLATLLSNLRVQERQSRVCTAVAIGIVAETCSPFTVLPALMNEYRVPEINVQNGVLK
AMTFMFEYIGDMAKDYIYAVAPLLEDALTDRDHVHRQTAATVVRHLAINCVGLGAEDAMV
HFLNLLIPNIYETSPHVIVRILDAIEGIRLCLGPGLVLNYIWAGLFHAARKVRDPFWKAY
NSAYIDNVDAMTPYYPDMPEDDEFYRHELDLWV
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaattaagcggctgcgagaagacaggcaaaagccgttcttcgaggatgacgac
gcagtgatggcagacgtatcggaaatgcaggctcttaacgatgatgagcgtcaaaacctg
cctcaggactcgtatactgctccacaagagttcctcaacgagactgtatctttgcaggct
gtcgatgagctgcaagctaacgagtccaacaagagcatttacaaccgtgcaaacgattac
aagcgcaaacgtctggatcgccaggaggctgatgacgatgagaaggatctaagctacaag
gagcgactggctttaagagacctggaacgagacgagaagcgagtacaggaggcaatcaga
aagaaggaggaggcaaatggaacatcccagaaggaacaggatgaacttcggaagttcgaa
cgggctcaaactcctcccagagtgggtcctcgtgtcagaaagggccgatcagataaacct
gtcactgaagacagtggtgagagaggacgaaagcggaagtcgagatgggacgttcccgac
gaaaaggaagccgagacgtctacaaccagcaaaataacagacgagtttcttgcttcggtg
cttccttcggaaggatacactgtacttactccccctgcttcatacaagccattaatcaag
agcaaggtgacagtcaagattgagggatacagcattccaggaggcagcacagaaactgcg
gtcgatagagcattggcgatccaggcagccgttccttcggctgacgctattcctggagtg
ggagatttggcgtactttaaggaaagtgatatgaagtactttggagcgctgatcaaacag
caggatgcagaagaacagggtctattgagtgctcgtgaaatgaaggagcgccaggtgatg
cgtctgattctaaaaatcaagaacggatctcctcagatgcgaaagcaggccatgagacag
ttgactgattctgctcgatctctgggtcccgaggcccttttttcgcaaatcatccccctt
ttcagagaaaggtccttggaggatacagaacgacactggcttgtcaaggtggttgatcga
gtcctgttcaagctgggtgatctggtaagaccatacacaccccgactattgtctgtcatt
gagccattactgatcgatgaggactatttcacacgagtcgagggacgggagctggttgcc
aacatctccaaggccgctggactcccacatatgatatcaacactccgacctaacgtcgga
cacgcagacgagtttgtccgaaacaccactgctcgatcgtttgccattgttgctagttct
ctgggagttcctgcattagttcctttcattaaagccgtctgcaagtcaaaaaagtcatgg
gaagctcgtcacacaggagcaaagattgtccagcagattgctattctcatcggatgcaca
gtgctgccatatctcggctctctcgtggattgtattggagacggattgactgacgacaac
cctaaggtccgtcagatgaccgcgcaggctcttgctgctcttgccgaagctgccgcccct
tacggtattgagtcgtttgagaacgtattggaacctctctggcttggggtgcgagagcag
cgaggtaaacatcttgtggcgtttctgaaagcgattggatacattattcctctgatgaat
cccgactatgccgattattataccaaggaagttatggctgtcgttcttcgagagttctat
tcccctgacgaggaaatgaagcgagtggttctggaagtggtcacgcaatgtgcccgctct
gagggtgtaaccgctcgatacattcgtgtcgaggttcttcccacgtactttaagtgcttc
tggacccgtcgaatggcttctgatcgagtgtgctacaagcttattctctctacaactgtg
gaactggctaataaggtcggtactgctgaaatcgtggaccgagttgctaaccatctcaag
gacgagtctgaccactttagacgacttacaatggagactattgacaaggttgtggccaat
ctcggaattgctgatatcgaggccggctcgaaactggaaacccgtctggttgacggtatt
ctgacggcgttccagctgcaatcaccagctgccaatgccaaccgagccgactcgattgtc
atgctacgaggcttcggaacagttatccaagctcttgatacacgagccgcaccctacttt
tctcagatcacgtcttccgtgctgttcagactctccaacaagtcccctattgttcgaagt
caggctgccgacttgattggccagattgctggagttatgaagaactgtggagaagatgag
gccctcaacaagctgggacaaatcctgtacgagcagcttggagaagagtatcctgaggct
ctgggttctctgcttggagccctcaaggccattgtcgctgttgttggtctggcttcaatg
actccccccattcgagatcttctgcctcgtctgacgcctattctgcgtaaccgacacgaa
aaggtacaggagaacaccatcgatctggttggtcgaattgccgaccgaggtcccgagtat
gtgtccgctcgagaatggatgcgaatctgtttcgagctcattgatctccttaaggcacac
aagaagaccattcaaaaggcagcaaataacacatttggatatatcgccaaggcgattggc
ccccaagatgtattggccacgctgctatctaacctgcgagtccaggaacgtcagtctcgt
gtctgtacagctgtggcgattggtattgtggccgagacttgttctccgttcaccgtgctt
cctgctctgatgaacgagtaccgtgttcctgagatcaacgtccagaacggtgttcttaaa
gccatgaccttcatgtttgagtacattggagatatggccaaagactacatttacgctgtg
gctcccctgctggaagatgctcttacagacagagaccacgtacatcgacagacggcagcc
actgttgtgcgccatctggccatcaactgcgtgggtctcggagccgaggatgccatggtg
cattttctcaatctgctgattcccaacatctatgagacgtctcctcacgtgatcgtgcgt
attttggacgccattgagggcattcgtctttgcctgggacccggcctggtgcttaattac
atttgggccggtctgttccatgctgcccggaaggtcagggatccgttctggaaggcatac
aactctgcgtacatcgataatgtcgatgccatgactccttactaccccgacatgccagag
gatgatgaattttaccgacacgagttggatttgtgggtttaa
DBGET
integrated database retrieval system
