KEGG   Yarrowia lipolytica: 2907365
Entry
2907365           CDS       T01033                                 
Symbol
YALI2_C00462g
Name
(RefSeq) Nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
yli  Yarrowia lipolytica
Pathway
yli03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    2907365 (YALI2_C00462g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yli03019]
    2907365 (YALI2_C00462g)
   04131 Membrane trafficking [BR:yli04131]
    2907365 (YALI2_C00462g)
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     2907365 (YALI2_C00462g)
Membrane trafficking [BR:yli04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    2907365 (YALI2_C00462g)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EML NBCH_WD40
Other DBs
NCBI-GeneID: 2907365
NCBI-ProteinID: XP_500981
UniProt: A0A1D8N835 Q6CED1
LinkDB
Position
C:3094117..3095076
AA seq 319 aa
MKPFNTGHEELVHDVAYDFYGRRIATCSSDTTVKVFDRNDSTGEWDISDSWKAHDASIIK
VCWANPEFGKVLATCSHDSTIKIWEENIREKQNSGKRWKRVATITDHKGPIYDLAFSPSH
CGLKLASISTDGQFKIHEALDPNAISSWTNIFETNTLSSAPSRQLQSSFCLSWGKSRFSK
EYVVACALEQSYIYQRQENGKYTQTGQLPAHGSIIRDISWAPSIGRGYQLIATACKDGLV
RIFKIEEPLTESGQLQVSLINQFDDHKGDVWRVSWNLTGTILSSAGDDGRVRLWKSTYNK
EFQCVGIVSAEQKHDAIED
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaaaccattcaacactggacacgaggagctggtgcacgacgttgcgtacgacttttac
ggccgtcgaattgccacctgttcgtccgataccactgtcaaggtctttgaccgaaacgat
tcgactggcgaatgggatatcagcgactcttggaaggcccatgatgcctccatcatcaag
gtgtgctgggccaatcccgagttcggcaaggttctggccacatgttctcacgattctact
atcaagatctgggaggaaaacatccgcgagaagcagaacagtggaaagcgatggaagcgg
gtggccactatcaccgatcacaaggggcctatttacgacctggccttctcgcctagccac
tgcggtctcaagctggcatctatctccaccgatggacaattcaagattcatgaggctttg
gatcctaatgctatcagctcgtggactaacattttcgaaaccaacacactgagtagtgcc
cccagtcggcaattgcagagttcattctgcttatcgtggggcaaatcacggttttccaag
gaatacgtggttgcatgtgccctggaacagtcgtatatctaccagagacaggaaaacggc
aaatacacacagacaggccagctgcctgctcatggatccatcatcagagatatttcgtgg
gctcctagtattggaagggggtaccagctgattgctactgcttgcaaggatggtttggtt
cgaatcttcaaaattgaggagcctctgactgagagtggacaactgcaggtgtctctgata
aaccagttcgatgatcacaagggagatgtttggcgtgtatcttggaacctcactggaaca
atcctgtcgtccgcaggagatgatggacgggtcagactgtggaaatctacttacaacaag
gagttccagtgtgtgggtatcgtttctgctgagcagaagcatgacgctattgaggattag

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