Yarrowia lipolytica: 2907587
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Entry
2907587 CDS
T01033
Symbol
YALI2_C00315g
Name
(RefSeq) Putative E3 ubiquitin ligase complex SCF subunit scon-2
KO
K10259
F-box and WD-40 domain protein MET30
Organism
yli
Yarrowia lipolytica
Pathway
yli04111
Cell cycle - yeast
yli04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
2907587 (YALI2_C00315g)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
2907587 (YALI2_C00315g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
yli04121
]
2907587 (YALI2_C00315g)
Ubiquitin system [BR:
yli04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
2907587 (YALI2_C00315g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
F-box
Beta-prop_EML
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_NWD2_C
WD40_MABP1-WDR62_1st
WD40_like
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_Vps41
F-box_4
KNTC1_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
2907587
NCBI-ProteinID:
XP_065950247
LinkDB
All DBs
Position
C:2271071..2273110
Genome browser
AA seq
679 aa
AA seq
DB search
MKSEARGEPHTNGSGDGADTASVAPTKTSQPPSAHPSSILTQYMKNFQGNLSPDMKDMRR
YCYRHHPDLSCSRESDEECMAQIQRSMDELPVKDREGISHCWSIFSASNPRQRSLILQGI
LTQCCFPQLSQVSSILKDLIRIDFISALPTEVAFKILCYLDTASLCRAAQVSKRWKMLAD
DDVVWYRMCEQHIDKKCTKCGWGLPLLDKKRLQQSKRSIELRAKNFNPKVDTQGQKVEDK
EDQTPQEKVEDLTGEKPSSSSDVQCGHKRKREDDNVAMAAPKTSKTRPWKEVYGERYMVE
RNWRTGKYSVRKFSGHKLAIMCLQFNHQFLITGSYDTTVKVWCVETGRLIRTLEGHRLGV
RALMFDDTKLITGSLDHTIRIWNYRTGQCVCTFRGHENKVLAVDFNDSLIVSGSADKTVK
VWNFETKSCFTLRGHTDYVNDVKIHSASGLLFSASDDNTVRVWDLETKRCLRVFGHQNTG
GHVHHIQSVIPLTLDHLEDVDHLDADESAIDDADASVVDEADNGHESAIDDSTDGPDLAI
ADGEIAVQRNSFSVGQVSQCDIFPEPKTPLARKHYPTHMLTGSLDNTIKLWDIKTGKCVR
TLFGHAEGVWSIAADHFRVISASHDKTVKVWELHSGRYMHTFGGYREAVTCVAMSDCKFV
TGCEDGVARLYNFDMPSRA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgaagcgcgtggagagccacacaccaacggcagtggcgacggcgctgacacg
gccagtgtcgcacccacaaaaacatcacagcccccctccgcacacccttcgtcgatcctg
acacagtacatgaagaacttccagggaaacctgtctcccgacatgaaggacatgcgacga
tactgctaccggcaccatccggacctcagttgctcccgcgagtccgacgaagagtgcatg
gcccagatccaacggtctatggacgagctgcccgtcaaggacagagagggcatcagccac
tgctggagcattttctcagcgtccaaccctcgccagcgctcgctcattctgcagggcatt
ctcacacaatgctgtttcccccagctgtcgcaggtaagctcgattctcaaggacctcatt
cgaatcgacttcatctcggcgctccccacagaggtggccttcaaaattctgtgctacctc
gacacggcatctctttgtcgagccgcgcaggtcagcaagcgatggaaaatgctcgcagac
gacgacgtggtctggtaccgtatgtgtgagcaacacattgacaaaaaatgcacaaagtgc
ggctggggcctgccgctgctggacaagaagcgcctgcagcagagtaaacggtccattgaa
ctgcgggccaagaacttcaaccccaaggtcgacacccaaggacaaaaggtggaggacaag
gaagaccaaaccccacaagaaaaggtggaggacctgacaggggaaaagccatcttcctcg
tcagacgtccaatgcggacacaagcgaaagagagaagacgacaatgtggccatggctgca
cccaaaacatccaagacgcgaccctggaaggaggtctatggagaacgatacatggtggag
cgcaactggcgtaccggcaagtactcggtacgtaaattttccggccacaagctcgccatc
atgtgcctgcagttcaaccaccaattcctcattactggttcctacgacaccactgtcaag
gtgtggtgtgttgagactggtcggctgatccgaaccctcgagggtcatcgtctgggagtc
cgggctctcatgttcgacgacaccaaactcatcacgggatctctggaccacactattcga
atctggaactaccgaacaggtcagtgtgtgtgtaccttccgaggtcacgagaacaaggtt
cttgcggttgatttcaacgattcattgattgtctctggttccgcagacaagaccgtcaag
gtgtggaactttgaaaccaagagctgcttcactctgcggggccacactgactacgtcaac
gacgttaaaatccacagcgcgtcgggcctgcttttttcggcctctgacgacaacactgtt
cgagtgtgggacttggagaccaagcggtgtctgcgggtgtttggtcaccagaacaccggt
ggacacgtgcaccacattcagtccgtcattccgttgactctcgaccatctggaggacgtt
gatcatttggatgccgatgagagtgccattgatgacgctgatgccagtgttgttgatgag
gccgacaatggtcacgaaagtgcaattgacgactctaccgatggtcctgatcttgctatt
gctgatggagagattgctgtccagcgaaactccttctccgttggccaagtgtctcaatgc
gacattttccctgagcccaagactcccctggctcgaaagcactaccccacacacatgttg
acgggatccctcgacaacaccatcaagctatgggacatcaagaccggcaagtgcgttcgc
actctgtttggtcatgctgagggagtgtggtcgattgctgcagatcatttccgagtgatt
tcggcgtcgcacgacaagactgtcaaagtctgggagctgcattctggtaggtacatgcac
acgtttggtggctaccgcgaggctgtcacctgtgtggccatgagcgactgcaagtttgtc
acgggctgcgaggacggtgttgcccgtctgtacaattttgacatgccttccagagcgtaa
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