Yarrowia lipolytica: 2907627
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Entry
2907627 CDS
T01033
Symbol
YALI2_C00958g
Name
(RefSeq) t-SNARE affecting a late Golgi compartment protein 1
KO
K08499
member of the syntaxin family of t-SNAREs
Organism
yli
Yarrowia lipolytica
Pathway
yli04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
2907627 (YALI2_C00958g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
yli04131
]
2907627 (YALI2_C00958g)
Membrane trafficking [BR:
yli04131
]
SNARE
SNAP-25[C] (Qc)
STX6
2907627 (YALI2_C00958g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
Wtap
NPV_P10
Abi_C
DUF5089
DUF7939
MscS_porin
DUF16
HH_AprE
Laminin_II
FlgK_D1
DUF5798
DUF7171
Sec10_N
GAS
TMP_3
PilJ
HOOK
Motif
Other DBs
NCBI-GeneID:
2907627
NCBI-ProteinID:
XP_500544
UniProt:
A0A1D8N6M4
Q6CFL8
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All DBs
Position
C:complement(1711865..1712524)
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AA seq
219 aa
AA seq
DB search
MDPFVQVCADAQNQLTQTRDLLEQFRSDPSNHNTLQDLTNITEELAETISDLSQSVEAAQ
GRPQQFGLSSEDIQDRSKQVAQLMSQLGQVQKEVSKIRNTGTPHGIYSDEPDDTEARTAG
LTQQMYASQIEEQDNALDGVYNTVNSLREQANVMSRELEDQSYLIDDLDRHADSAGSRLQ
RGLKKVDWVVRKNQETLGSCCITLLIVALIILLVLLIAL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggatccttttgtacaagtctgcgcggatgcgcaaaaccagctgacgcagacgcgagac
ctgctggagcagttccggtcggacccttcaaaccacaatacccttcaggatctcacaaac
atcacagaggagctggcagagacgatatccgacctttcacagtccgtcgaggccgcccag
ggccgaccacagcagtttggtctcagcagcgaagatatccaggaccgtagcaagcaggtt
gctcaactcatgtcgcagctgggtcaggtacagaaggaggtgagcaagattcggaacaca
ggcacgccacatggcatctactccgatgagccagacgacacggaggcccgaactgcaggg
ctcacccagcagatgtatgcaagccagatcgaggagcaggacaacgctcttgatggcgtc
tacaacacggtgaactcgttgcgggaacaggccaacgtcatgtcgcgggagctggaggac
cagtcgtatctcattgatgacctagatcgtcacgccgactcggctggctctcggttacag
cgtggtcttaagaaagtggattgggtggtgcgaaagaaccaagagactctgggttcatgc
tgcatcactctgttgattgtggccctaatcattctgcttgttctgctcattgctctgtaa
DBGET
integrated database retrieval system
