Yarrowia lipolytica: 2907659
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Entry
2907659 CDS
T01033
Symbol
YALI2_E00846g
Name
(RefSeq) mRNA cleavage and polyadenylation factor CLP1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
2907659 (YALI2_E00846g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2907659 (YALI2_E00846g)
Enzymes [BR:
yli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
2907659 (YALI2_E00846g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
2907659 (YALI2_E00846g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
nSTAND3
AAA_24
ATP_bind_1
SRPRB
AAA
KTI12
AAA_35
MMR_HSR1
AAA_18
ATPase
RuvB_N
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-GeneID:
2907659
NCBI-ProteinID:
XP_506077
UniProt:
Q6BZT5
A0A1D8NQM1
LinkDB
All DBs
Position
E:5033398..5034750
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AA seq
450 aa
AA seq
DB search
MSLPGLNFSTTETNTTESTHTIDLKPETEWRYEVAIGGTLHVTLKSGTAEIFGTELPPNK
ELSIQGKGSIYTWQGCQFVYTAIAGPKGLMSDYTTEDTPHMTMAINLHFALEKMRNEAEQ
KPKDVAGPRVLIAGPPNSGKTSLAKILLAYATKCDRKPIYISLDPTSVNLGPPGGVHAVQ
ITDLLDVETYGGFGSSEISGPQKLQPLILLSKYFGLEKTTDNFKLFKRSVAQLAVPVLSK
LAHDVEAQKSGLIIDTPRVPGNQNKTIEVNLLTDVVSDFGVNVIVVIGNDRLYADLMKKY
PVGASGPTVVKVPAFACMDDDESYNRDAQQQEIQQYFYGDAKDMKLGPRIVTVDFSTLHV
YKIKPSTQFDDDKADLLERVAEANILPNTVLTVMHAVPGSSEKEILDSEVQGYLHVTEVD
EEKNKVKILTPVPGRLPSQVMLLGDTRYHE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctggcctcaacttctcaacaactgagacaaacactacagaatccactcat
accatcgacctcaaaccagagacggaatggagatacgaagtggccatcgggggaacctta
catgtcacgctgaaatctggaaccgctgaaatcttcggtacagagctgccacctaacaag
gagctcagtatccaaggaaaaggaagcatttacacatggcagggctgccagttcgtatac
acggcaattgcaggacccaagggattgatgtctgattacacaaccgaagacactccccac
atgaccatggctatcaacctgcactttgctctggagaagatgcggaatgaggctgaacag
aagcccaaggacgttgctggacctagagttctcattgctggaccccccaactcgggcaaa
acctccctggctaagattttgttagcctatgctacaaaatgtgatcgaaagcccatatat
atttctttggatcctacttcggtgaacctgggacctcctggaggagtgcatgctgtccaa
attacagatctgctagatgtggaaacatatggaggattcggatcatcggaaatttcaggc
cctcagaaactacagcctcttattttgctctccaagtactttggacttgagaagactacg
gataacttcaagctcttcaagcggtctgtggctcagctagcagttcccgtcctgtccaaa
cttgcacacgacgttgaggcgcaaaagtctggtctcatcatcgacactcctcgagtaccc
ggcaaccaaaacaaaacaatcgaagttaacctgctaacggacgtggtgagcgactttgga
gtcaacgtcattgtcgttattggcaacgatcgactttatgcagacctcatgaagaaatac
ccagtgggagcctccggtcccacagtagttaaggtaccagcatttgcttgcatggatgac
gatgagagctacaaccgagatgcccagcaacaggaaattcagcagtatttttatggagat
gctaaggatatgaaacttggtccacgaatcgtcactgtcgatttctctactctccacgtt
tacaagatcaagccttccacacagtttgacgatgacaaggcggatttgctggagagggtc
gcagaggccaacattctaccaaacacagtactgacggtcatgcacgctgttcctggctcg
tccgaaaaagagattctcgactcagaggtccaaggttaccttcacgtgacggaggtggac
gaggagaagaacaaggtgaagattctgactcctgttcctggacgactaccctcccaggtc
atgcttcttggtgatacacgataccatgagtaa
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