KEGG   Yarrowia lipolytica: 2908088
Entry
2908088           CDS       T01033                                 
Symbol
YALI2_E00655g
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
yli  Yarrowia lipolytica
Pathway
yli03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    2908088 (YALI2_E00655g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yli03019]
    2908088 (YALI2_E00655g)
   03036 Chromosome and associated proteins [BR:yli03036]
    2908088 (YALI2_E00655g)
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     2908088 (YALI2_E00655g)
Chromosome and associated proteins [BR:yli03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     2908088 (YALI2_E00655g)
    COMPASS/SET1 complex (yeast)
     2908088 (YALI2_E00655g)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR75_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C CFAP251_N Beta-prop_EML NBCH_WD40 DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd PAC11 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_SPT8 WD40_RFWD3 WD_LRWD1
Other DBs
NCBI-GeneID: 2908088
NCBI-ProteinID: XP_505701
UniProt: A0A1H6Q154 Q6C0W1
LinkDB
Position
E:3983409..3984431
AA seq 340 aa
MESVPASIETYKTLKPSKTLRYHHNDPITSLDFDDTGAYAVTAGTDESIQLYSAHKGTHQ
RSSYSKKYGAHLARFTHNSMSIVYASTKEDDTIRYLSLHDNSYIRYFRGHKDKVHALNVS
PISDVLLSASMDHTVRLWDLRSPHCQGVLNLVSPNLIAFDPRGLCFGVANTSAQDLSLYS
VSAWGSDPFATFALPAPPGDGWASVEFSNDGKYILLATYGEQHHVIDAFTGNLTHKLVGH
HPLRRDQDNMRGGSTHTAFSVDGRTVFGCSRDGKIIVWDLQDRVDERGRLYPSKALNCAP
NAASPQILGVNPASMQLATADKELTFWLPEKDVAEPPKEA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggaatcggttccggcaagtatcgagacatacaagacgcttaagccgtccaaaacgctc
cggtaccaccataacgaccccatcacatcgctcgatttcgatgacactggagcctacgcc
gtcacagctggaacagatgaatccattcagctgtattcggctcacaagggcactcaccag
cgatccagctactcgaagaagtatggcgcgcatttggcccggttcacacacaacagcatg
agcatcgtctacgcttccaccaaggaagatgacacaattcgatatctgtcgttgcacgac
aattcgtacatccggtactttagaggccacaaggacaaggtgcacgcgctcaacgtgtct
cctatcagtgatgtgttgctttcggcatcaatggatcacactgtgcggctatgggatctc
cggtcgccccattgtcagggagttttgaacctggtgagcccgaatctgattgcatttgat
ccccgaggtctgtgttttggcgtggccaacacatcggcccaggacctgtctttgtactct
gtttctgcatggggatccgaccccttcgccacgtttgctcttcctgctccccctggagac
ggatgggcctctgtagagttctccaacgacggaaagtatattctcttggcgacttacgga
gagcagcaccacgtcattgatgctttcacgggtaatcttacgcacaagctcgttggccac
caccccttaagacgcgatcaggacaacatgcggggcggctccactcacactgcattctct
gtggacggccgcacagtgtttggctgctcgcgagacggcaagattattgtctgggacttg
caggaccgagtcgacgagcgaggacgactgtacccttccaaggctctcaactgcgcaccc
aacgcagcctcccctcagattcttggtgtcaatccagcctccatgcaactggccacagca
gataaagagcttactttctggctgccggaaaaagacgtggccgagcctccaaaggaggca
tag

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