Yarrowia lipolytica: 2908268
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Entry
2908268 CDS
T01033
Symbol
YALI2_E01095g
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2908268 (YALI2_E01095g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2908268 (YALI2_E01095g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2908268 (YALI2_E01095g)
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2908268 (YALI2_E01095g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
2908268 (YALI2_E01095g)
mRNA degradation factors
5'-3' decay
Decapping complex
2908268 (YALI2_E01095g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Gene silencing
piRNA pathway
2908268 (YALI2_E01095g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
2908268
NCBI-ProteinID:
XP_505690
UniProt:
Q6C0X2
A0A1D8NPF5
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All DBs
Position
E:complement(3963539..3965107)
Genome browser
AA seq
522 aa
AA seq
DB search
MSEWKESLNVPKKDTRHKTEDVTATKGTGFEDFFLKRELLMGIFEAGFENPSPIQEEAIP
IALAGRDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLG
KHLGIKVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEAD
KLLSPDFTPIIEQVLHFFPEDRQILLFSATFPLTVKAFMDRNLHKPYEINLMDELTLRGI
TQYYAFVDEKQKLHCLNTLFSKLDINQSIIFCNSTVRVELLARKITELGYSCYYSHAKMI
QSHRNRVFHEFRNGTCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFG
HLGIAINLINWNDRYNLYKIEQELGTEIKPIPAQIDKNLYVAESSENIPRPFPIADMPRG
KESKRNEQFQPQQNQNQQQQQDGQNQHSLGPVPPQGPPQGIPGPGYGYPPPQGFPQGMPP
QGMPPQGAGGYMPPTPYGYQQQGFPPQPPQGFNNGQPQQPSQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtggaaagagtcgttaaacgtgcccaaaaaggacacgcgtcacaaaaccgaa
gatgtgaccgccacaaagggtacagggttcgaggactttttcctcaaacgagagctgctc
atgggcatctttgaagcaggattcgaaaacccctcgcccattcaggaagaggcgatcccc
attgccctcgcaggccgagatattctggcccgagccaagaacggaaccggcaagaccgcc
gcgtttgtgatcccagccctccagcaggtcaaccccaaagttaacaagatccaggcgctt
atcatggtgcccacccgagagctggcactccagacctcacaggtttgcaagaccctaggc
aagcatcttggcatcaaggtcatggtcaccaccggtggcaccaacctcagagacgacatt
atgcgtctggaagacacggtacacgtgttggtcggcactcccggccgagtgctggatcta
gcaggaaagggcgtcgctgatctcagcgagtcgcccatgtttattatggacgaggccgac
aagttgctgtcgccggacttcacacccatcatcgagcaggtgctccatttcttccctgag
gaccgtcagatcctgctcttctccgccaccttccctctgactgtcaaggcctttatggac
cgaaacctgcacaagccttacgaaatcaacctgatggacgagctgaccctaagaggtatc
acgcagtactacgcctttgtcgacgagaaacagaagctgcattgtctcaacacgctcttt
tctaagctcgacatcaaccagtccatcattttctgcaactccactgtgcgagttgagcta
cttgcccgaaagatcactgagctgggatactcatgttactactcccacgccaagatgatc
cagagccatcgaaaccgagtcttccatgagttccgaaacggcacgtgccgaaacctcgtc
tgttccgatttgcttacccgaggtatcgatatccaggccgtcaacgtggtcatcaacttt
gacttccctaagaacgccgagacctatctccatcgaattggtcgatctggacgatttggc
catctcggtattgccatcaacctcattaactggaacgaccgatacaacctgtacaagatt
gagcaggaacttggaactgagatcaagcccatccctgcccagatcgacaagaacctctac
gttgccgagtccagcgagaacatcccccgacccttccccattgctgatatgcctcgaggc
aaggagagtaagcgaaacgagcaattccagccccagcagaaccagaaccagcagcagcaa
caggacggtcaaaaccagcactctctgggtcccgtacctccccagggtcctcctcagggc
attcccggccccggatacggctaccctcctcctcagggcttccctcagggaatgcctcct
cagggaatgcctcctcagggagccggcggctacatgccccctactccctatggttaccag
cagcagggcttccctcctcagccgccacagggcttcaacaatggccagccccagcagccg
tcgcagtaa
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