KEGG   Yarrowia lipolytica: 2908276
Entry
2908276           CDS       T01033                                 
Symbol
YALI2_F00626g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
yli  Yarrowia lipolytica
Pathway
yli03020  RNA polymerase
yli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    2908276 (YALI2_F00626g)
  09124 Replication and repair
   03420 Nucleotide excision repair
    2908276 (YALI2_F00626g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yli03021]
    2908276 (YALI2_F00626g)
   03400 DNA repair and recombination proteins [BR:yli03400]
    2908276 (YALI2_F00626g)
Transcription machinery [BR:yli03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     2908276 (YALI2_F00626g)
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      2908276 (YALI2_F00626g)
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB DUF7568 DUF7351 zf-C2H2_ZN142 Ogr_Delta Anti-TRAP CPxCG_zf Cytochrom_NNT
Other DBs
NCBI-GeneID: 2908276
NCBI-ProteinID: XP_505540
UniProt: Q6C1C2 A0A1D8NNV4
LinkDB
Position
F:complement(join(2382197..2382506,2382573..2382598))
AA seq 111 aa
MTSRFCLECNNMLYPREDKEDRKLLFACRNCPYTEFASTPLVFKHQLITNIEETAGVTTG
IGADPTLPRSDKECPKCHEHDVVFFQSQQKRAETTMILFFVCNNCNNIFRS
NT seq 336 nt   +upstreamnt  +downstreamnt
atgacgtcgcgattttgtctcgagtgcaacaacatgctctatccgagagaggataaggag
gatagaaagctgctgtttgcatgccgaaactgtccgtacacggagtttgcatccactcct
ctggtgttcaagcatcagctgatcaccaacattgaggagacggccggagtgacaaccggt
attggagcagatcccactctgcctcgatccgacaaggagtgtcccaagtgtcacgagcac
gatgtggtcttcttccagtcgcaacagaagcgtgcggagaccaccatgattctgtttttt
gtctgcaacaactgcaacaacattttccggtcttag

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