KEGG   Yarrowia lipolytica: 2908437
Entry
2908437           CDS       T01033                                 
Symbol
YALI2_F00146g
Name
(RefSeq) Replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
yli  Yarrowia lipolytica
Pathway
yli03030  DNA replication
yli03410  Base excision repair
yli03420  Nucleotide excision repair
yli03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    2908437 (YALI2_F00146g)
   03410 Base excision repair
    2908437 (YALI2_F00146g)
   03420 Nucleotide excision repair
    2908437 (YALI2_F00146g)
   03430 Mismatch repair
    2908437 (YALI2_F00146g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yli03032]
    2908437 (YALI2_F00146g)
   03036 Chromosome and associated proteins [BR:yli03036]
    2908437 (YALI2_F00146g)
   03400 DNA repair and recombination proteins [BR:yli03400]
    2908437 (YALI2_F00146g)
DNA replication proteins [BR:yli03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    2908437 (YALI2_F00146g)
  DNA Replication Termination Factors
   ELG1-RFC complex
    2908437 (YALI2_F00146g)
Chromosome and associated proteins [BR:yli03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    2908437 (YALI2_F00146g)
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     2908437 (YALI2_F00146g)
  Check point factors
   HRAD17(Rad24)-RFC complex
    2908437 (YALI2_F00146g)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_16 AAA_22 AAA_3 RCF1-5-like_lid nSTAND3 Mg_chelatase Viral_helicase1 RuvB_N DNAX_ATPase_lid AAA_assoc_2 AAA_5 AAA_19 NTPase_1 MeaB NACHT
Other DBs
NCBI-GeneID: 2908437
NCBI-ProteinID: XP_505116
UniProt: A0A1D8NME4 Q6C2J6
LinkDB
Position
F:1102486..1103487
AA seq 333 aa
MSEAGPSKKRKGEPEFELPWVEKYRPMYLDDVVGHTETVERLKIMAKDGNIPNLLISGLP
GIGKTTSVHCLARTLLGPQLYKDAVLELNASDDRGIEVVRGKIKNFAQKKVTMPPGKHKI
IILDEADSMTAGAQNALKRTMELYSDTTRFAFACNQSNKIIEAIQSRCAILRFGRLSNEQ
VLERLLHIVEAENVQCSDDGLSALIFSAEGDMRQAINNLQGTVSGFGFVNSSNVWKVVDS
PHPVVVKSMLDACSKGEVTEACESLKQLWTKGYSAQDIISTMFRVTKTLEVPEALRLEYI
KEIGFTHMRILEGITTYLQLAGCVARLCGIQVK
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgagtgaagccggaccatcgaaaaagcgaaagggagagcccgagttcgagctgccctgg
gttgaaaagtacagacccatgtatctcgacgacgttgtgggtcatacagaaaccgttgaa
cgacttaagatcatggccaaggacggaaacattcccaacttgttgatttccggtctcccc
ggtattggaaagaccacctccgtgcattgtcttgcgcgtactcttctcggtccccagctg
tacaaagacgctgtcctggagctcaatgcttcagatgatcgaggtatcgaggtggttcga
ggtaagatcaagaactttgcccagaagaaagtgaccatgcctcctggtaaacacaagatc
atcattctggatgaggccgacagtatgactgctggtgcccaaaatgcgctcaaacgaacc
atggagttgtactctgatactactcgattcgcctttgcctgcaaccagagcaacaaaatc
attgaggccattcagtcgcgatgcgccattcttcgatttggccgactctctaatgaacag
gtgctcgagcgactgctgcacattgtcgaggctgaaaacgtgcagtgctcagacgacggc
ctgtctgctctcattttctcggcggagggagatatgcgtcaggcgatcaataacttgcag
ggaactgtgtctggattcggattcgtcaactcttccaacgtttggaaggtggtggactcc
ccccatcccgtggtcgtcaaatccatgttggatgcctgcagcaagggtgaggtgaccgag
gcatgcgagtcgctcaagcagctgtggaccaagggatacagcgcccaggatatcatctcc
acaatgttccgagtcaccaagacactggaggtgcccgaggcgctacggctggagtacatt
aaggagattggcttcactcacatgagaatcctcgaaggaatcaccacatatctgcagtta
gcaggctgcgtcgccagattgtgtggtattcaggtcaagtga

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