Yarrowia lipolytica: 2908576
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Entry
2908576 CDS
T01033
Symbol
YALI2_E01104g
Name
(RefSeq) General transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03022
Basal transcription factors
yli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
2908576 (YALI2_E01104g)
09124 Replication and repair
03420 Nucleotide excision repair
2908576 (YALI2_E01104g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2908576 (YALI2_E01104g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2908576 (YALI2_E01104g)
03400 DNA repair and recombination proteins [BR:
yli03400
]
2908576 (YALI2_E01104g)
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
2908576 (YALI2_E01104g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
2908576 (YALI2_E01104g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
2908576 (YALI2_E01104g)
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
2908576 (YALI2_E01104g)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
nSTAND3
YtxC
Motif
Other DBs
NCBI-GeneID:
2908576
NCBI-ProteinID:
XP_505677
UniProt:
A0A1H6PNY9
Q6C0Y5
LinkDB
All DBs
Position
E:complement(3936193..3938550)
Genome browser
AA seq
785 aa
AA seq
DB search
MKFYIDDLPVLWPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ
QHYPEHRKIIYCSRTMSEIEKALAELKNLMKFRTETLGFEEDFRGLGLTSRKNLCLNPNV
RYEKKGYIVDEKCRAMTSGIAKQKLAAGEDVTLCEYHENMNDIEPHNYIPPGVFTFEDIL
AYGEEHKTCPYFTVRRMMAFCNVIIYSYHYLLDPKIADRVSKELSKDCIVIFDEAHNIDN
VCIEALSVDITEDSLKRATRGANHLAKKVSEARSSDSEKLKNEYNKLVDGLRDLESGEQE
DTFLANPVLPEDLISEAVPGNIRKAEHFVAFLKRFIEYLKSRMKVLHVISETPASFLKHL
RDLTYIERKPLRFCAERLSYLVRTLELTHVDDYTALKEIAVFATLVSTYDTGFQLILEPF
ETDQATVPNPILHLTCLDASIAIKPVFDRFSSIIITSGTISPLDMYPKMLNFETVVQESY
TMTLARRAFCPLIVTKGSDQVAISSRFEIRNDPSVVRNYGNLLIEFSKITPDGLVVFFPS
YLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRTACSNGRGAVMLCVAR
GKVSEGIDFDHQFGRTVLMIGVPFQYTESRILKARLEFLRDNYHIRENDFLSFDAMRHAA
QCLGRVLRGKDDYGVMVLADRRFAKKRNQLPKWINQAILDADTNLSTDMALAAAKKFLRT
MAQPMNKEDQEGVSVWSLEQLQEYQGSKKDGGYRLAPEDAMDIDEKDLEEGLREVEQAKK
EIAAR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctacatcgatgatctgccggtgttgtggccataccctcggatctatcccgag
cagtatgcctacatgtgcgacatcaagaaaaccctggacgtgggaggcaactgcatcttg
gaaatgccttcaggaacaggcaagactgtctccctgttgtctctgacagtggcgtaccag
caacactatcccgagcatcgaaagatcatttattgttcccgaacaatgtcggagatcgag
aaggctctggctgagttgaagaacctcatgaagtttcgaactgagactctaggctttgag
gaggactttagagggctgggtctgacctcacgaaagaacctgtgtctgaatcccaatgtg
cgatacgaaaagaaaggttacattgtcgacgagaagtgccgagccatgacatctggaatt
gccaagcagaagctggctgcaggagaagacgttactctatgtgaataccacgagaacatg
aacgacattgagcctcacaactacattccacctggtgttttcacctttgaggacattttg
gcgtatggcgaggagcacaagacatgtccttattttactgtgcgtcgaatgatggccttc
tgcaacgtcatcatctactcttatcattatctactcgatcccaagatcgccgaccgagtt
tccaaggagctgagcaaagactgcattgtcatttttgatgaggcccataatatcgacaac
gtctgcattgaggctctgtctgtcgacattactgaagactccctgaaacgagccactcgg
ggagcaaaccatctggccaagaaggtcagtgaggcccgatccagcgactctgagaaattg
aaaaatgaatacaacaaactggtggatggattgcgagatctggaatccggagaacaagaa
gatacgtttctcgctaaccctgtgctccctgaagatcttatttcggaagctgtgcctgga
aacattcgaaaggcagaacatttcgtggccttcttgaaacgattcattgaatatctcaag
agtcgaatgaaggtgcttcatgtcatttccgaaacccctgcatcgttcttgaaacatctt
cgagatttgacatacattgaacgaaagcctcttcgattctgcgctgagcgtctatcgtat
ctggtcagaaccctcgagttgactcacgtcgatgattacactgctctcaaggagattgct
gtgttcgccaccttggtgtctacctacgacaccggcttccagctcattctggagcccttt
gagaccgatcaggccaccgttcctaaccccattttgcatcttacatgtttggacgcctcc
attgctatcaagcctgtctttgatcggttctcaagcattatcatcacatccggtaccatc
tcccctctagatatgtacccgaaaatgttgaacttcgagactgtggttcaggagtcgtac
accatgacactggcacggcgagccttctgtcctctcattgtgaccaagggttcagaccag
gtagccatcagttctcgattcgagatccgaaacgatccttcagttgtccgaaactacggt
aaccttctgattgaattttctaagatcacacctgatggccttgtcgtcttcttcccttca
tatctttacatggagtctatcatttccatgtggcagactatgggtattctggacgaagtg
tggaagtacaaactcattctggtcgagactcctgatgctcaggaaacctctcttgcctta
gaaacttaccgaactgcctgctccaacggtcgaggcgctgtcatgctctgtgtcgctcga
ggaaaggtttcggaaggtatcgatttcgaccaccagtttggaagaactgtgcttatgatt
ggtgttccttttcagtacaccgagtcgcgtatcttgaaggctcgtctcgagtttttgcga
gataactaccacattcgagagaacgacttcttgtctttcgatgccatgcgccatgctgcc
cagtgtctgggacgagtcttgcgaggtaaagatgactacggtgtcatggtgttggctgac
agacgttttgccaagaagcgaaaccagctgcccaaatggatcaaccaggccattttggat
gctgacacaaatctgtccacagatatggctctagctgcagccaagaagtttttgcgaact
atggcccagcctatgaacaaggaagaccaggagggtgtttcagtgtggtcattggagcag
cttcaggagtaccagggatccaaaaaggatggaggttaccgacttgcccccgaggatgcc
atggatatcgatgaaaaggatcttgaagagggtctcagagaagtcgaacaagccaaaaaa
gaaattgctgctcgataa
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