Yarrowia lipolytica: 2908865
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Entry
2908865 CDS
T01033
Symbol
YALI2_E00796g
Name
(RefSeq) Nucleoporin
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
yli
Yarrowia lipolytica
Pathway
yli03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2908865 (YALI2_E00796g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2908865 (YALI2_E00796g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2908865 (YALI2_E00796g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2908865 (YALI2_E00796g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
2908865 (YALI2_E00796g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
2908865
NCBI-ProteinID:
XP_505983
UniProt:
Q6C029
A0A1D8NQB3
LinkDB
All DBs
Position
E:4759816..4763109
Genome browser
AA seq
1097 aa
AA seq
DB search
MFGSSNTTFGGGSSFGNNNNSSGGGLFGNTNNASSGGGMFGAKPATSTFGGGGFGASNTN
TSTNAFGAASSSPFGSSSTPSPGQCPGTTLTPFQPFTDKDTANGKMMTNIYETITMMPQY
RTWSQEELRLADYQQGKQYGTAGATATNTFGAANTASPFGSSSNTNNSPFGNSSTSGGNT
FGGGFGQNKPATGGLFGSSNTNTGGGFGTSSTSGGFGSNTTSNTGGFGGFGQNNNATSNT
GAFGAAKPSPFGGTSSFGSGNTGGGMFGSTNNTSNTTSGFGGGFGQNNANTNTTGGFGGG
FGQNNTTNNSGGGLFGNNNTTNNTSGGFGQTSTSTGFGFGQNKPATTGFGQTNNTGGGLF
GNTNTNTNTNTGGGMFGQANNNTSGGGLFGQNNNTNNSGGGLFGQTNNTNTTNNAFGANN
NTSGGGLFGQKPATTGFGATNTGTTTGGGLFGNTNNNTNTNTGGGLFGNNNNTNTNTGGG
FGGFGQNNNTANTGTTGGGLFGQNKPATGGLFGQNTTTPASTGTTGGGFSFGQNNNNASS
NTGATGGGLFGQNKPATGGLFGNNSSTTTTNTTGGGLFGNNNAASNTSATTGGGLFGAKP
ATTGGGLFGSNNTTNTSNTGGGLFGNNNANTSNTGGGLFGNNNANNNANTSTGGGLFGNN
NAMNNNNMNNMGARNNQTPSLTASIDQNPYSNNPLFSGQTPPALTSSGSNGTAKDPLTTS
LTSKSGAKSGNNGVSSASYLSSSRPLFQPRKKTSAIASEHVAHQRNYPEDRFERISLPEV
ASAGNTSVSSVGNTSMSTASKPRHSLFSPKTDEFLLGSDAFVPRREIRKLVIDRSGDEAE
LRRLTQGEDPELEDPHQHQNVHDTPSKAPLKSSLSTPNSQQRKKSVSFSAAGDNSVLNGL
NDPDSLEMAPVSQSGTPSFFPKSTASPIHKAVSVESSATASPTATQTSDEEIVDDQGYWF
SPRLMALKTMTTEQLKAVPNFVVGRKGFGKIQFLEPVDLTAVDLDEIPNNVITFTKQTCI
VYNDDQERPPMGEGLMVPCKITLYNCRPIAKDTKKPITDPKHPYARRWIARLEQQKNTRF
ISYDLETGTYVFETDHP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaagcagcaacacgacatttggcggcggctcgtcgttcggtaacaacaacaac
tcgtctggcggcggtcttttcggcaacaccaacaatgcatcttctggaggcggaatgttt
ggggctaagccagccaccagcacttttggtggcggtggatttggagcctcgaacaccaac
acctccaccaatgcgtttggggcagcttcttcatcccccttcggctcgtcttcgacccct
tctcctggtcaatgccccggtaccactcttactccctttcagccgtttaccgacaaggat
actgccaacggaaagatgatgaccaacatctacgagaccatcaccatgatgcctcagtat
cgcacttggtctcaggaggagctgcggctggctgattaccaacagggtaagcagtacggc
actgctggcgccacggccaccaacacctttggggctgccaacaccgcttctccctttgga
tcttcttccaacaccaacaactcgccgtttggaaactcttccacttcgggtggcaatact
tttggtggcgggttcggccagaacaaacccgctactgggggcctgtttggaagctccaac
accaacactggtggtggatttggtacctcgtccacttctggaggctttggctccaacacc
accagcaacactggtggattcggcggattcggtcagaacaacaacgccactagcaacacc
ggtgcatttggggctgccaagccctcgccctttggtggtacctcgtctttcggcagtggc
aacactggtggaggcatgttcggaagcaccaacaacacctccaacaccaccagtggcttc
ggaggtggattcggacagaacaacgctaacaccaacaccactggcggtttcggcggagga
tttggccagaacaacaccaccaacaactctggcggaggtctgttcggtaacaataacacc
accaacaacacctcggggggatttggccagacttccacctctactggcttcggtttcggt
cagaataagcctgctaccaccggtttcggccagaccaacaacactgggggtggtctcttt
ggcaacaccaacaccaacaccaacaccaacaccggcggcggaatgtttggccaggctaac
aacaatacctcaggtggagggctgtttggtcagaacaataacaccaacaacagcggggga
ggtctgttcggtcagacaaacaacaccaacactacgaataacgcatttggtgcgaacaac
aacacttctggaggaggcctgtttggacagaagcccgcaactaccggtttcggagcaacc
aacacaggcactacaaccggcggaggactgtttggcaacactaacaacaacactaacacc
aatacaggcggtggattgttcggcaataataacaacactaacacaaacactggtggaggt
ttcggagggtttggccagaacaacaacactgccaacactgggaccaccggtggcggtttg
tttggccagaacaaacctgctactggagggctgtttggccagaacaccaccactcctgcc
tcgaccggtactactggaggaggcttctcgtttggccagaacaacaacaatgcctcttcc
aacactggagccaccggaggaggcctcttcggccagaacaagcctgcaaccggcggtctt
ttcggaaacaacagctcaaccaccactaccaacaccactggcggagggctgtttggaaac
aacaacgccgcctccaacacctctgctaccaccggtggaggtctgtttggtgccaagcct
gcgactactggaggaggtctgtttggcagcaacaacaccaccaacacctccaacaccgga
ggaggtctgtttggcaacaacaacgctaacaccagcaacactggcggtggattgttcggt
aacaataacgccaacaataacgctaacacctctactggtggcggtctgttcggcaacaac
aatgccatgaataacaataacatgaacaacatgggtgccagaaacaaccagactccttcg
ctcacggcgtccattgaccagaacccctactcgaacaaccccttgttctctggtcagact
cctcctgctctgacctcttctggttccaacggcactgccaaggatcctctgaccacctct
ctaacctccaagagcggagccaagagcggcaacaacggcgtatcttctgcatcttacctt
tcgtcgtctcgaccactgttccagcctcgaaagaagacgtctgccattgcttccgagcat
gttgcgcaccagcgaaactacccggaggaccggtttgagcgaatctctctacccgaggtc
gcctctgctggcaacacttctgtgtctagcgtgggcaacacatctatgtccacggccagc
aagcctcgccactctctgttctctcccaagacagatgagttcttgctggggtcggacgcc
tttgtgcctcgacgagagatccgaaagctggtcattgaccgttctggcgacgaggctgag
ctgcgacgtctgactcagggcgaggaccctgagctggaggatcctcaccagcaccaaaac
gtccatgatactccttccaaggctcctctcaaatcatctctcagtactccgaacagccag
cagcgaaagaagtcagtgtctttctctgcggctggagacaactccgtgttaaatggtttg
aacgaccctgactcgcttgaaatggctcccgtttctcagtcaggaactccttcattcttc
cccaagtctacggcctctcctattcacaaggctgtgtctgtggagtcctccgccactgct
tctcccactgccacccaaacttcggacgaggagattgtcgatgatcagggctactggttc
tctccccgactcatggctctcaagaccatgaccaccgaacagctcaaggccgtgcccaac
tttgtggtgggccgaaagggcttcggtaagatccaattcctcgagcccgtggatctgact
gcggttgatctggacgagatccctaacaacgtcatcaccttcaccaagcaaacttgtatc
gtgtacaacgacgaccaggagcggcctcctatgggcgagggtctcatggtaccttgcaag
ataactctttacaactgccgacccatcgccaaggacacaaagaaacccatcaccgacccc
aagcatccctatgcaagacgatggattgctcgtctcgagcagcagaagaacacccgattc
atctcctacgatctggagactggtacctacgtgtttgagactgaccacccttaa
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