Yarrowia lipolytica: 2909083
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Entry
2909083 CDS
T01033
Symbol
YALI2_C01165g
Name
(RefSeq) Putative ATP-dependent RNA helicase ucp12
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
yli03012
]
2909083 (YALI2_C01165g)
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
2909083 (YALI2_C01165g)
Translation factors [BR:
yli03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
2909083 (YALI2_C01165g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_DHX29
DEAD
OB_NTP_bind
Helicase_C
RWD
HA2_C
AAA_19
UBA_DHX29
HA2_N
AAA_22
nSTAND3
PhoH
UBA_7
ATPase
T2SSE
AAA_29
NPHP3_N
AAA_16
STT3-PglB_core
FtsK_SpoIIIE
Zot
PNISR
Motif
Other DBs
NCBI-GeneID:
2909083
NCBI-ProteinID:
XP_501356
UniProt:
Q6CDA6
A0A1D8N9E0
LinkDB
All DBs
Position
C:complement(347726..351718)
Genome browser
AA seq
1330 aa
AA seq
DB search
MAKKNTPTPKKTAVEPASKGKGKGKKSPDPEPLPGPPKPTARQIVANSSWTGKLPATLLH
EHVQKLKWERVDYDMRRVKTGFIATVILKQKNPKTQEVEEIRYMPPADLVQGKDTALEAR
HLAATYALHRISSHKNLSMVLPTDHKTLWQKCDKKKSEDIKSGQATADDYVPDPFIVKRK
RETERADREKKRQIERERAEKSKVEVKVAIESSGKTTANGDPKKSRESPDPSRKPGPRPR
ELFPPKSWDYAPKAEMSQELRNLVESVIKKKVTWEKNEADDSTTAANDKLIAEITNLGFR
KSHVTEALQYASPEATELLEWLLLHVPEDDLPGKFLPDKYTTGVSFHTLELSREYMVKRF
QEDGYNRDVAIDVLERVDWSERLGNVELCKRLIGEPASDSPSCRVSEMTISEVSGDSESE
SLSIWNEEMEALEAIFEPERLSVADDRISVSLNCRNLENGLLQATFWRSNDYPASFPSIA
VRAIKKGHRLPHYIQLAIMRRALEMSRDTLSGDAQIWAICEWLEDNCCEIIDNPGELAGV
SGGVGIVNQPSMVVRKGQNKSRPIPKAQLNTKQIQESFVKRFVGGEWDKMKKSRQSLPAW
EKQRDVIDALSASQIVLVTGETGSGKSTQTVQFILDHMVSTTSTTPNIICTQPRRISAMG
LAERVAAERMSELGTEVGYIIRGENKTSKETLLRFVTTGVLLKMIQGDFKTSLSNVTHVV
VDEVHERSVDGDVLLILLKSLLTVFPHLKIVLMSATVDSNTFINYFGGHGKVGHVHIEGR
TFPVDDVYLDGVIEQSNYGEGEPVNKIITKLGEGVNYQLLSHLISHVDTQLTAQSSKGGV
LIFLPGVAEISQCCAVLSQLGTCHVIPLHSGLSPQQQRLVFSTPPRGKRKVVVATNIAET
SITIPDIVAVVDSGRVKETVYDAENNIVRLVSTWVSQAAAKQRRGRAGRVSRGTCYKMYT
QQAEQGKMPERTVPEMSRTPLEQLYLYVKSMNVGDVGKFLSRAIDPPSVTAISTAQSILT
NMGCISVSGALTALGKHMSMIPGDLKVAKLLIIGSVLGCSKLMLAVAGVLSVKSPFLSLA
DKRDDIKASRSQFSTGNGDLLTDATAYLEWEARKHVKTTRLWCKENFLSSEVLYNIDSTV
KQFSEILRNLNYSINGTNTSNNLARAVIASSLNQQIAKVRHPDKKFSQLASGAVQVDPEA
REYKYYLQNERVFIHPSSTAFSERNLPQEACFMAYFTRMETSKVFLRDVTPVSKYAMLLF
GGKLDIDYTGRGVVIGDWLQITCWPRIGVLAAKLRQLLEEGLQRKFDNPREELDPELVNA
VVKLLETDGL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaaaacacgccgacgccaaaaaaaacggccgtggagcccgcatccaaggga
aagggcaagggcaaaaagtctccggaccctgaaccgcttcccgggccgccaaaacccact
gcccgccagattgtggccaattcgtcctggaccggaaaattaccggccactctgctccac
gaacatgttcagaagttgaaatgggagcgggtcgactatgacatgcgacgggtcaagact
gggttcatcgccaccgtgattcttaaacagaagaaccccaagacccaggaagtggaggag
atcagatacatgcctcctgcggatctggtccagggcaaagacacggccctggaagcccgc
catctagctgccacatacgcgctgcatcgcatctcgagtcacaaaaacctgtccatggtt
ctccccacggatcataagactctctggcagaaatgtgacaagaaaaagagtgaagatatc
aagtctggacaggccactgccgacgactacgttcccgatccatttattgtgaaacgaaag
cgagagaccgagcgtgctgaccgcgaaaagaagcgccagattgaaagggaacgggcagaa
aaaagtaaggtggaggtgaaggttgcgatcgagtcgagtggaaagacgacggcgaacggc
gaccccaagaagtcacgtgagtcacctgatccgtctaggaagcccggtccccgtccccga
gagcttttccctcccaaatcatgggactacgcgcccaaggccgaaatgtctcaggagctg
cgaaacctggtggaaagcgtcatcaagaagaaggtcacgtgggagaagaatgaagccgat
gattcgaccacggcggcaaatgacaaactgattgccgaaatcactaacctgggattccgc
aagtcccacgtaaccgaggctcttcagtacgcttctccggaggctacggagctgctcgaa
tggcttctactacatgttcctgaggacgatttgcccggcaagtttctgcccgacaagtac
actacgggagtgtcgttccacacgctggagctgtcacgtgagtacatggtcaagcggttc
caggaagacggatacaacagagatgtggccattgatgtactggagcgagttgactggagc
gagcggttgggtaatgtggagttgtgcaagaggctaattggtgaacctgcctccgattcc
ccgtcttgtcgggtcagtgagatgaccatctccgaggtatccggggattcggagtccgag
tctctgtcaatctggaacgaggaaatggaggctctggaagccatttttgagcccgaaaga
ctgtcggttgcggacgaccgaatcagtgtgtctctcaactgtcgaaatctcgaaaacggc
ctgttacaagccactttttggagatccaatgactacccggcatcgttcccttcaatagcc
gtaagagccatcaaaaagggccacagattgccacattacatccaattggccattatgcgc
cgggcgttagagatgtcacgtgacacgctgtctggggacgcgcagatttgggccatttgc
gagtggctggaggacaactgttgtgagatcatagacaatcctggcgagcttgctggggtc
agtggaggtgttggtattgtcaatcagccctctatggtggttagaaagggccagaataag
tctcgacccattcccaaggctcaactaaacaccaaacaaatccaggagagttttgtaaag
cgatttgttggtggggaatgggacaagatgaagaagagcagacagtcgttgccggcatgg
gaaaagcagcgggatgtcattgatgctctttctgccagtcagattgtactggtgaccgga
gaaaccggttccggtaagtccacccagactgttcagttcattctggaccatatggtgtcc
accaccagcacgacgcccaacatcatctgtacacagcctcgacgaatttccgccatgggt
ttggctgaacgagtggctgcggaacgaatgtctgaactcggtaccgaggttggttacatc
atcagaggcgaaaacaagacttccaaggaaacacttttgcggtttgtgactactggagtg
ctgctgaagatgatccagggcgatttcaagacttctctgagcaatgtgactcacgtggtg
gtagatgaggtccatgaacggtctgtcgatggtgatgtattgctcatccttctcaagagt
cttctgacagtgttcccgcatctcaagattgtgctcatgtctgccacggtcgactcaaac
acattcatcaactactttgggggccacggcaaggtcggtcacgtgcacattgagggcaga
acattcccagtcgacgacgtatacctcgacggagttattgaacagagcaactacggagaa
ggagagccggtcaacaaaatcatcaccaaactcggcgagggagtcaactaccagctgctg
agtcatctcatcagtcacgtggacacccaactcacggcgcagtcatccaagggaggagtg
ctcattttcctgcccggagtggccgaaatctcgcaatgttgcgcggtgctgagtcagctg
ggcacctgtcacgtgattccgctccactccgggctctcgcctcagcagcagcggctggtt
ttttcgactccgcccaggggcaagcgcaaggttgttgttgccactaatattgccgagacg
tcgatcaccattccggatattgtggctgtggtggactctgggcgtgtcaaggagacggtt
tatgatgctgagaacaacattgtgcgtcttgtgagcacgtgggtatctcaggccgctgcc
aagcagcgtcgtggacgagctggacgagtttctcgaggcacctgctacaaaatgtacact
cagcaggcggagcagggcaaaatgccggagcgaactgtgcctgaaatgtctcggactccg
ttggagcagctgtatttgtacgtcaagagcatgaatgttggcgatgttggcaagtttctg
tctcgggccattgatcctccttctgtgactgccatttccaccgcccagtccatcctgacc
aatatggggtgtatttcggtgtctggagctctgactgcgttgggaaagcacatgtcgatg
attcctggagacctcaaggtggccaagttgctgattatcggctcggttctcggctgttcc
aagctcatgttggcggtggctggagttctttctgtcaagtcgccatttctgagtctggcc
gataagagagacgacatcaaggcgagtcggagccagttttcgaccggaaatggcgacctg
ttgaccgatgccactgcctatcttgaatgggaggcccgcaaacacgtgaaaaccacccgg
ctgtggtgcaaggagaactttctgtcctccgaagtgctctacaacattgacagtaccgtc
aagcagttttccgagattctgcgcaacctcaactactccatcaacggcaccaacacctcc
aacaacctggcccgagccgtcattgcctcgtctctcaatcagcagattgccaaggtgcgc
catccggacaagaagttctcgcagctggcgtcgggagctgttcaggtcgatcccgaagct
cgagagtacaagtattatcttcagaacgagcgggtttttatccacccgtcctccacggcg
ttttctgaacgaaatctgccccaggaggcctgcttcatggcctactttacccgcatggag
acctccaaggtgtttctgagagacgtgacgccagtgtcaaagtacgccatgctgctattt
ggaggcaagctggacattgactacaccgggcgaggcgtggtgatcggcgactggctccag
atcacgtgctggccccgaatcggagtgctggcggccaaattgagacagctgcttgaggag
gggcttcaacgcaagtttgacaatccccgggaggagctggatccagagctggttaacgcg
gtggtcaagcttctggagaccgatggtttgtaa
DBGET
integrated database retrieval system
