Yarrowia lipolytica: 2909199
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Entry
2909199 CDS
T01033
Symbol
YALI2_C01205g
Name
(RefSeq) Chromo domain-containing protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2909199 (YALI2_C01205g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2909199 (YALI2_C01205g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
2909199 (YALI2_C01205g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
2909199 (YALI2_C01205g)
SLIK complex
2909199 (YALI2_C01205g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Cdh1_DBD_1
CHD1-like_C
Chromo
Helicase_C
HTH_Hrp3
HDA2-3
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
2909199
NCBI-ProteinID:
XP_501282
UniProt:
A0A1D8N936
Q6CDI0
LinkDB
All DBs
Position
C:complement(join(48956..53110,53242..53244))
Genome browser
AA seq
1385 aa
AA seq
DB search
MNPDFNDDPELYGLRRSRRSAVTTANEARKRYVDYSSSEEDVPKRPQRKKQAKKSNGIVL
SDESEMSLDDEESEEDDEDSEEDDYAPTKKAKKSSSSRRKGGRNKSSAREPSPDYQNLRF
SSRNAKVVNYNIDHDDDEFLEDEDEDALQDAYGDAAANDTYDYATTTSTEAVDMVLDHRR
KEGDDDSQITDLFDAKRHLEFYIKWQNYSHLHNTWETYDSLAGFKGIKRVDNYIKLNVLE
YAELQRDASPEDIEAMELRREREQEEYAEYKLVERIIASDRVAVDNGATQLQYLVKWKRL
NYSDATWEDAEEIAKIAEDEVERFQDRLNSKINPSQSAVYPANSRPPFEKLTEQPGFIKG
GELRDFQLTGINWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLVYARKQHGPHLVVVP
LSTVPAWQETFEFWAPGINYLAYLGNTESRKALRDHEFYNKTGNKKPKFNVLLTTYEYIL
KDRAELGSIKWQYLAVDEAHRLKNAESALYESLKEFRVANRLLITGTPLQNNIKELAALV
DFLMPGKLTIDLEINFENPDEEQEGYIRELHKRLQPFILRRLKKDVEKSLPSKTERILRV
EMSDMQQDYYKNIISKNYTALNAGATGGHQMSLLNIMTELKKASNHPYLFPTAESKFLSL
AENGASRENVFRGMIMTSGKMVLLDKLLTQLKKDGHRVLIFSQMVRMLDILGDYLQIKGY
QFQRLDGTVPSATRRIAIDHYNAPDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQ
ADLQAMARAHRIGQKNHVMVYRFVSKDTVEEQVLERARKKMILEYAIISLGITDKGSSNN
KKTEPSTSELSEILKFGAGNMFKANDNQDKLENMNLDDVLNHAEDHITTPDLGESHLGGE
EFLKQFEVTDYKADVDWDDIIPANELAKIKADDLRRKDEEYVKEQMDLMNRRRAASQRAS
TAALESSDENEESGGRRVVKRKKEDKFLNEREIRGLYRTILRYGDVSVMWDKLFNDGTLP
QRKSDLIKEAYFDLIDQSKREVEEREKQIKEEAEAAAAAAAKAAASRGGGDTALDEKKPS
NTKKAVLFTFQGVKNINAELLISRPADMKLIRSQVTDTFKFDEPLKSVHGWNCEWDEDCD
ARLLIGTKKYGYGAWTFIRDDPRLKFGDKFYLEEHRVDKKEAREKTGAKVPGAVHLGRRV
DYLISVLKGEAVHTNNDGNKKRIAIKERVRKSESPAVSTPQPPKKAAIKRDPSIKRDPSI
KRETPKRETPVPKKIPGPPTADDYSDYESMDDEACRTTLKPVKASLKRLKKGEDGLDKKA
WLEVLKKELSTVGHHIDSEAQKVSDKKREKTLKHLWAFASFFWPSRVKSNRIRAMYEKVS
GAAKK
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgacttcaacgacgaccccgagctctatgggctgcgacggtcccggagatca
gcggtgactacggccaacgaggcccgcaagagatacgtcgactattcgtcgtcggaagag
gacgtgcccaaacgtccccagagaaagaagcaggccaaaaagagcaacggaatcgtcctc
tccgacgagagcgaaatgtctctggatgatgaggaatcagaggaggacgatgaggactct
gaggaggacgactacgcaccgaccaagaaggctaagaaatcgtcttcttccagacgcaag
ggtggacgaaacaagtcgtctgcccgagagccgtcccccgactaccagaacctgcggttc
tcgtctcgtaacgccaaggtggtcaactacaatattgaccatgacgatgacgaatttctg
gaggacgaggatgaggacgctctgcaggacgcatacggtgatgccgctgctaatgacaca
tacgactacgccaccaccacgtccaccgaggcggtggatatggtgctggaccatcgtcga
aaagaaggcgacgacgactcgcagattacagatctgtttgacgccaagcgacacctcgag
ttctacatcaagtggcagaactactcgcatctgcacaacacgtgggagacgtacgattcg
ctggccggcttcaagggaatcaagcgagtcgataattacatcaagctcaacgtgctggag
tatgcagagctgcagcgagatgcatcccccgaggatatcgaggccatggagctgcgacgc
gagcgcgaacaggaggagtacgctgagtataaacttgttgagcgaatcattgcatcagat
cgtgtcgctgtcgacaatggagccactcagttgcagtatctcgtaaagtggaagcgactc
aactactcggacgccacctgggaagatgccgaggagatcgccaagattgccgaggacgaa
gtcgagcggttccaggaccggctcaactcgaaaatcaatcccagccagagcgcagtctac
cctgccaactcacgtcctccgtttgagaagcttaccgagcagcctggcttcatcaagggt
ggtgaacttcgagacttccagctgaccggaatcaactggatggccttcttgtggtctcga
aacgaaaacggtattcttgccgacgaaatgggactcggtaaaaccgtccaaaccgttgca
tttctctcatggcttgtgtacgctcgaaagcagcacgggccccacctggtggtagttcct
ctgtctactgtgcctgcctggcaggagacctttgagttctgggcgcctggtatcaactac
ctcgcatatctcggcaacaccgagtctcgaaaagcacttcgtgaccacgaattctacaac
aaaactggtaacaagaaacccaagttcaatgttcttctgaccacctacgagtacattctt
aaggaccgagccgagctggggtccatcaagtggcagtacctggctgttgacgaggcccac
cgtctcaagaacgccgagtcagctctctacgagtctctcaaggagttccgagtcgcaaat
agactgctcatcaccggtactccgctgcagaacaacatcaaggagctggctgctctggtt
gacttcctgatgcctggcaagctcaccatcgatctggaaattaattttgagaaccctgac
gaagagcaggagggttacattcgtgagcttcataagcgcctgcagcctttcatcttgcgt
cgactcaagaaggatgtcgagaaatcactgccctctaagacagagcgaattctgcgagtc
gaaatgtccgacatgcagcaggattactacaagaacatcatttccaaaaactacacggct
ctgaacgccggagccaccggaggtcaccagatgtcacttctcaacatcatgacggagctc
aagaaggcctccaaccatccgtacctgttccccactgccgagagcaagttcctcagcttg
gctgagaacggcgcttctcgagaaaacgtcttccgaggcatgattatgacctctggtaag
atggttcttctcgataagctgctcactcagctgaaaaaggacggtcatcgagttctgatt
ttctcccagatggttcgaatgctcgacattttaggcgattatttgcagattaagggctac
caattccagcgtctggatggtactgtcccctctgccacccgtcgaattgcaattgaccat
tacaatgcccctgacagtaacgacttcgtcttcttgctgtccactcgagctggaggtttg
ggtatcaacctgatgacggccgatacagtcatcatttttgattcggattggaacccccag
gctgatctgcaggccatggctcgagcccatcgaatcggtcagaagaaccacgtgatggtc
tatcgatttgtgtccaaggacactgttgaagagcaggttctcgagcgtgccagaaagaag
atgattttggagtacgccatcatctcccttggtatcaccgacaagggttcttccaacaac
aaaaagactgagccgtcgacctcggagctgtctgagatcctaaagtttggcgccggaaat
atgttcaaggccaacgataaccaggacaagctggagaacatgaacctagacgatgttctg
aaccacgcagaggaccatatcaccactcctgatctcggcgagagtcatcttggcggcgag
gagttccttaagcagtttgaggtcactgactacaaggccgatgttgattgggacgacatt
atccctgccaacgagctcgccaagatcaaggctgacgatctgcgtcgaaaggacgaggag
tacgtcaaggaacagatggatctaatgaatcgacgtcgagctgcctctcagcgtgcctcc
actgctgctcttgagtcctctgacgaaaatgaggagagtggagggcggcgtgtggtcaag
cgcaagaaggaggacaagttcctcaacgagcgggagatcagaggtttgtaccgaacaatt
ctacgttacggcgacgtctccgtcatgtgggataagcttttcaacgacggtactttgccc
cagcgaaagtccgatctcatcaaggaagcctactttgacctcattgaccagagtaagcgg
gaggttgaggagcgagaaaagcagatcaaggaagaggctgaagctgctgccgctgctgcg
gcaaaggctgctgcttctcgaggcggtggagatactgccctggacgagaagaagccctcc
aacaccaaaaaggccgttcttttcaccttccagggcgtcaagaacatcaacgccgaactg
ctcatctcacgaccagccgacatgaagctcattcgaagccaggtgacggacactttcaag
ttcgacgaacctctcaagagtgtgcatggctggaactgtgagtgggacgaggactgtgac
gctcgtctgctcattggtaccaagaagtacggttatggagcctggaccttcattcgagac
gatccacgtctcaaatttggagacaagttctaccttgaggagcaccgagttgacaagaag
gaggctcgagagaagactggagccaaggttcctggtgccgttcacctcggtcgtcgagtt
gactacctcatctctgttctcaagggcgaggctgttcacaccaacaacgatggcaacaag
aagcgaattgccatcaaggagcgtgttcgaaagagcgaatctcccgcagtgtccactcct
caacctcccaagaaggctgctatcaagcgagatccttccatcaagcgagatccttccatc
aagcgagagactcccaagcgagagactcctgtccccaagaagattcctggacctcccacg
gctgacgactactcagactatgagtcaatggacgatgaggcgtgtcgaacgactctcaaa
cctgtcaaggcgtctctgaagcgcctcaagaagggcgaggatggtttggacaagaaggcc
tggctggaggtcctcaagaaggagctgtccacggtgggccaccacatcgactccgaagcc
cagaaggtctctgataagaagcgggagaagactctcaagcatctgtgggcgtttgcatcc
ttcttctggcccagcagagtcaagagtaaccgtatccgggcaatgtacgagaaggtcagc
ggagccgccaaaaagtag
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