Yarrowia lipolytica: 2909399
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Entry
2909399 CDS
T01033
Symbol
YALI2_C00073g
Name
(RefSeq) General transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
yli
Yarrowia lipolytica
Pathway
yli03022
Basal transcription factors
yli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
2909399 (YALI2_C00073g)
09124 Replication and repair
03420 Nucleotide excision repair
2909399 (YALI2_C00073g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2909399 (YALI2_C00073g)
03400 DNA repair and recombination proteins [BR:
yli03400
]
2909399 (YALI2_C00073g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
2909399 (YALI2_C00073g)
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
2909399 (YALI2_C00073g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
2909399
NCBI-ProteinID:
XP_501438
UniProt:
Q6CD24
A0A1D8N9L9
LinkDB
All DBs
Position
C:596633..597655
Genome browser
AA seq
340 aa
AA seq
DB search
MNAIDGTSRQLKDTEDQTLDDTPSLLSIIIDAHVPSWEEIKSQISISEAVASILVFINAH
LALHNSNSVNVIGYNASGARILYPPKSGVESTRSKEREERSESVSDGEQAPSKKDHSMYR
QFKTVDEVVQTELWNMLNHTNYVEEEKQHNSAISGALSLALGFINKHVFVDESRMRARIL
LLTVGHKNETIQYIPTMNCIFAAQKLKIPVDVCKLGPGSDQVFLQQACDSTHGIYMDISE
KNSKTPKGLVQYLLSGFISDPSLRPHIVLPTQSNVDFRAACFLTKQVVDIGYVCSVCLCI
MSQIPSNRRCPTCDTTYSEKTLAGLGRKPLKKKKKKVVKP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccattgatggaacgtcccgccagctcaaggacacggaggatcagactctggac
gacacgccgtcgttgttgtcgatcatcattgacgcccatgtgccgtcgtgggaagaaatc
aagtcgcaaatatccatctcggaggctgtggcttccattctcgtcttcatcaacgcccac
ttggctctgcacaactccaacagcgttaatgtgattggatacaacgccagtggtgctcga
attttgtatcctcctaaaagcggcgttgaatcgactagatcaaaggagagagaagagaga
tcggagagtgtaagcgatggagaacaggcacccagcaagaaggaccactccatgtacaga
caattcaagacggtggacgaggttgtgcagacggagctgtggaacatgctgaaccacacc
aactacgtggaggaggagaaacaacacaactcggccatctccggagcactgagtctagct
ctagggttcataaacaaacatgtgtttgtggacgagtcgagaatgcgagcaaggatcctg
ctgctcaccgtcggacacaaaaacgaaaccatccaatacatccctactatgaactgcatt
ttcgccgcccaaaagctcaagatccccgtcgatgtgtgcaaactgggtcctggatccgac
caggtctttctgcaacaagcatgcgactcgacacacggcatctacatggatatcagtgaa
aagaactccaaaacacccaagggtttggttcagtatctgctatcgggctttatctcagac
cccagtttacgaccccatattgtgctacccacccagtccaatgtggactttcgagcagca
tgtttcctgactaaacaggtggtggatattggctacgtctgctctgtgtgtctgtgtatc
atgagccagattcccagcaacagaagatgtcctacatgcgatactacctactctgagaag
actttggctggtttgggtcgaaaacctctcaagaagaagaaaaagaaggtcgttaagcca
tag
DBGET
integrated database retrieval system
