Yarrowia lipolytica: 2909578
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Entry
2909578 CDS
T01033
Symbol
YALI2_B00324g
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2909578 (YALI2_B00324g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yli03041
]
2909578 (YALI2_B00324g)
Spliceosome [BR:
yli03041
]
Complex B
Other components
Prp19-related factors
2909578 (YALI2_B00324g)
Complex C
2909578 (YALI2_B00324g)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
AAA_12
AAA_11
Aquarius_N_2nd
AAA_30
AAA_19
ResIII
AAA_22
nSTAND3
UvrD-helicase
SLFN-g3_helicase
ATPase_2
FtsK_SpoIIIE
AAA_25
UvrD_C_2
AAA
AAA_17
AAA_16
SMC_N
AAA_5
SAM_LFY
Motif
Other DBs
NCBI-GeneID:
2909578
NCBI-ProteinID:
XP_502209
UniProt:
A0A1D8NCH9
Q6CAV3
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All DBs
Position
B:join(2548508..2548662,2548721..2552228)
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AA seq
1220 aa
AA seq
DB search
MALSTDLLKISPLAALLNKDNVSINSVYQFIEKNGFNDRDLHTLESLNGLEKLWPVYNKK
QANTNAIVVALLVLAKANDGFDLWTVFEKSPENFGHFYKTVLNLVAGDKPTRIQKVRTKL
LRFLTVSFQWLDSQLVRSEAGALVSVYTWMHMDEKVRENLLKGNKRLGKLWRGAMKAYDK
GDKKEDIDKQSSFLSTLTDIMLQKEHDTEFVDTYLCFLISIVSQIPSRRFANSVIKSKNV
CSLLKKCNADLLKTLDFYVHFPMDDFSGEELTPLQVRKLQTQYLEKFQLYAFENLPEKLR
LASLCNFASLTKDEVKKELSNLSKAEIESLLNLLGSSGKKLVTLNYQLASLTSNRNLNAE
FDAIDLLPTEKSLNSQYSELTLPRLTLQYLSMNDFILKSLRLQQVEIFHQINSDVENVVN
RLKTRKRNDAGEEITGFSKYATKILNEAVLHVAPPFVGESNPGYCRVEITVDIYRQDKRE
WDSLKPGDVVFLLKLGTGLEQLRGAFVHDILDSDNKSIVQWSGYNEIESSQRKFILDVDP
AHWGDVFQANVLMRRKSKEAAFYPTLKTIHGLHKIRSILPEWISGVFLGYGEIPEQPTGV
VDLLDTFQTSKQVYEAFPEKFECTEEASAPFKLDTSDDKWSLIPYTPVDKGPYFVQEDHS
NKLKFTQAQGQAIVSGTLPGLTVIVGPPGTGKTDVATQIILNLYHSHPSEVTLVIAHSNQ
ALNHLFEKIALLDVNQKHLLRLGHGEDMIREEVSKGGSFSKVGRAENLLEGRATLLREVD
SLAESIGAEGAHGDSCETAHHFFRVFVLPKYQKWQKEGGKFPFDEFFKDKKDHSDAGKWY
HIDRIFTDLADIRPVEHMSGKAQSDYMLVKEAKVVAMTAKYASMHHDSLVRLGFRYSSLV
AEEAAQLTEIELVIPMTLQKETDALKRVVLIGDHKQNAPIVTNELVRKCNFDQSTFGRFI
RLGMPTFLLDSQGRAKPSISDIYGWRYGGLKNLPHTKEGVYQYANSGFLHDVQFINVDDY
EGQGETEVAPHVIQNLGEAEYAIALYQYMRLLGYPADKITILTMYNGQKALLQEICSRRC
ASTKGDREIFGMPRVITTVDQYQGEQNDYVIVSLVRTKHVGYLRDVRRMTVAVSRARLGL
YVLGRYDMLAQCVELEEMMKKLGGSHNLEAVMGEMYEQKERLSGDKPKDAAASVTLTGVV
HLGQYVEQMTQQYKSRHGLV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggccctatcgacagacctgctcaagatctcgcctctagcagcgctgctcaacaaggat
aacgtgtcgataaactcagtctatcaattcatcgagaagaacggcttcaatgatcgcgac
ctgcataccctagagtctctgaatggactagagaaattatggccagtttacaacaagaaa
caggccaacacaaatgccattgtcgtggcactccttgttcttgccaaggccaatgacgga
ttcgatctatggacggtgttcgagaagagccccgaaaattttggccatttttacaaaacg
gtactcaatctcgtggccggagacaagccaacacggatccagaaagtgcgaaccaaacta
ctgcggtttctgaccgtttctttccagtggcttgactctcagttggtgcgatcagaggca
ggagcattggtgtcggtctacacatggatgcatatggacgagaaggtgcgagagaacctg
ctcaagggaaacaagcgactggggaagctctggagaggcgccatgaaagcctacgacaag
ggcgacaagaaggaggacatcgataaacagtcttcgtttctatcgacacttacagacatc
atgttacagaaggagcacgatacggagtttgttgacacatatctgtgttttctcatctct
attgtgtcgcaaatcccctcaagacgattcgccaacagtgttatcaagtccaagaatgtg
tgttcattgttgaagaagtgtaacgccgatttgctcaagaccctcgatttttacgtgcat
tttcccatggacgatttctccggcgaagagctgactcctctgcaagtgcgaaagctgcag
acccagtatctggaaaagttccagctctatgcattcgagaatctgcctgaaaagctgcga
ctcgcgagtttgtgtaactttgcatctctcacaaaggatgaggtcaagaaggagctgtcg
aacctgtccaaggctgaaattgagagcctgttgaacctgctgggaagctcaggcaagaaa
ctggtgactctcaactaccagttggcatctctcacttcaaaccgaaacctgaatgccgag
tttgacgctatagacctgctgcctacagaaaagtcgctcaattcacagtactccgagctt
actctaccccgacttactctgcagtatctcagtatgaacgactttattctcaagtcgttg
cgtcttcagcaggtcgagatcttccatcagatcaatagtgatgtggagaatgtcgtcaac
cgtctcaagacgagaaaacgaaacgacgccggagaggaaatcacaggattcagcaagtac
gctacaaagatccttaacgaggctgttctgcatgtggcacctccttttgtgggcgagtcc
aatcccggatactgccgtgtggagatcaccgtggatatttacagacaggacaagcgagaa
tgggactcattgaaacctggtgacgtcgtgtttttgctgaagttggggacagggcttgaa
cagctgcgtggtgcttttgtgcacgatatcctcgactcagataataagagtattgtgcaa
tggagtgggtacaatgagattgagtcgtcccagcgaaagttcatattggacgtggatccg
gcccattggggcgatgtctttcaggccaacgttcttatgagaagaaagtccaaggaggca
gccttttatcctaccctgaagactatccatggtctacacaaaatccggtctattctccct
gagtggatcagtggagtgtttttaggctacggagagatccctgagcagcctacgggtgtg
gtggatttgctagacactttccagactagcaaacaggtctatgaagctttccccgaaaag
tttgaatgtactgaggaggcttctgctccattcaagcttgatacctcggatgacaagtgg
agcttgattccttacactcctgtggataaggggccttattttgttcaagaagatcactcc
aataagctcaagttcacacaagcgcaaggtcaggccattgtttccggcactctacctggt
ctcactgtgatagtcggccctcccggtaccggtaagactgatgtggctactcagattatc
ctcaatctgtatcacagtcatccctctgaggttacattggtgattgctcatagtaaccag
gctctgaaccatttgtttgagaagatcgctttgcttgatgttaaccagaaacacctcctg
cgattgggtcatggtgaagatatgattcgggaggaggtgtctaagggaggttcttttagc
aaggttggtagagccgaaaacctgcttgagggacgtgccaccttgctacgggaggtggac
agcctggccgagagtattggtgctgagggtgctcatggagatagttgtgagactgcgcat
catttcttcagagtctttgtgctgcccaagtatcaaaagtggcagaaggaaggcggaaag
ttcccgttcgatgaatttttcaaggataagaaggaccattctgatgcgggcaagtggtac
catattgacaggatcttcaccgatcttgctgacattcgtcctgtggaacacatgtctggc
aaggctcagagtgactacatgcttgtcaaggaagctaaggtggttgccatgacagccaaa
tatgcttcgatgcatcacgactcgctagttaggttgggtttcagatactcttcgcttgtt
gcagaagaagctgcccagctaaccgagattgagttggtgatccccatgactcttcagaag
gagacagacgcgctcaagcgggtggtgttgatcggagatcacaagcagaacgcccccatt
gtgactaatgagctagttcgcaagtgcaactttgatcaaagcacgtttggccgatttatc
cggcttggcatgcccacttttcttctcgactcccagggacgagccaagccatcgatttca
gacatttacggttggcggtatggtgggctcaagaacctaccgcacaccaaggagggcgtc
taccagtacgcaaactctggctttctgcatgacgttcagttcatcaatgtggatgactac
gagggacaaggagagaccgaggtggcacctcacgtcatccagaacctcggcgaggctgaa
tatgctattgctctgtaccagtacatgagacttcttggctatcctgctgacaagatcacc
attctgacaatgtacaatggtcagaaggccttgttgcaggagatttgttctcgacgatgt
gcctctacaaagggcgaccgggagatttttgggatgcctagagtcatcaccacggtcgac
cagtatcagggagagcagaacgactacgtcattgtttcgcttgtgcgaacaaagcatgtg
ggttatctgcgggacgtacgacgtatgacggttgcagtgtctcgagctagattgggtctc
tacgttcttggccgttatgacatgcttgcccaatgcgtcgagctggaggagatgatgaag
aagcttggaggttctcataacctggaggctgttatgggagaaatgtatgagcaaaaggag
cgcctgtcaggagacaagccaaaggacgctgctgcctcggtgactctgacgggcgttgtc
cacctcggccagtatgtcgagcagatgacgcagcagtacaagtctcgtcatggcttagtc
tga
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