Yarrowia lipolytica: 2909629
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Entry
2909629 CDS
T01033
Symbol
YALI2_B00304g
Name
(RefSeq) Cleavage factor two protein 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
yli
Yarrowia lipolytica
Pathway
yli03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
2909629 (YALI2_B00304g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2909629 (YALI2_B00304g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
2909629 (YALI2_B00304g)
U7-dependent histone pre-mRNA processing factors
2909629 (YALI2_B00304g)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
2909629
NCBI-ProteinID:
XP_502172
UniProt:
A0A1D8NCF2
Q6CAZ0
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All DBs
Position
B:2443460..2445859
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AA seq
799 aa
AA seq
DB search
MLNLEPIGKSTLLSFGETRVLIDFALDSQEAAERGDSFFETLNLVLFTHANAAHLGAYAL
ACKLYPALAAVPAYGTLPVINMGRIATLEAYRSQGLLSSEHITATEIEIIFDNITSIKYL
QPIGIGVRSKGEVATTATEDGNSTELTTTQVTTHETLTITAFNSGHSLGGTIWRLQHQQD
NVVYAVDWNHAKDSHLSGAAFLQKGGQIVSALHRPTVMVCGSQTGLRLKRRDILLWSSIQ
KALKRGGSVLLPTSVGSRVLEVIHMLDDLWTNNQNSQQGVTLVLLTHLGARLLEYASSML
EWMSPSIIAEWEKKNESPFQTRNFKIVHSMDQFDKVVKGGNGQFVVVSVGEDLESGFSRL
LFNRLASDERNSVLFTERSEGNSLATELQDKWEKTERDGNSAKMDFQTTLKMPTYTPLSE
AEMKEYRTTVESQQKDLQMVKAMELRNKELLEEAEAEEMMDSSDDEDVSRMQGSGQEYGF
LHGTVLDVDVRDAVGSLRNFPFYQKRQRVSEYGIPIHPSDFARVEERPEVAWKERDRNEF
DSDEPRKRQRRRTKAAAEEQEERVVEDADDAPETITSLDNQPIRVSYEDVDLNIICHVDF
VDLSGRIDERSLGMIMHSIHPKKLLLLDDSRRADDLCSYLKREDDTDVHVLRGLTTAGTH
SFAVDIQLTPELSRLLNWQQLSGGLSLAHVVGKVAKNEDKSEDTPLAALALQPIVDAADL
AVAPRIEPLRVGDIRLAELKQALGKLGFRAVFQAGGVLVVDGKVSIRKVDESNLVVDGGI
GSDFYAIKEVVRAQLAQIG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatcttgagcccattggaaaatcgacattgctgtcgttcggtgagacacgtgtt
ctcattgactttgctcttgattcgcaagaagccgccgagcgaggagatagcttctttgag
actctcaatctcgtgctcttcacacacgccaatgcagctcacctgggagcatatgctctt
gcttgcaagttgtatcctgccctggcggctgttccggcctatggaacgcttccggtgatc
aatatgggccgaatcgccactctggaggcctacagaagccagggactactttcatcagaa
cacatcacagccacggagatcgaaatcatctttgacaacattacatccatcaagtacctg
caaccgattggtattggggtgcgaagcaagggggaggtggcaacgacggctacggaggat
ggaaacagcactgaactgacgactacacaggtgactacacatgagacgttaaccatcacg
gctttcaactcgggtcactcgttgggtggaactatttggagacttcaacatcaacaagac
aatgtggtgtatgctgttgactggaatcacgctaaggactcgcatttgtctggagctgcg
tttctacaaaagggaggccagatcgtcagtgctctgcatagacccacagtcatggtttgt
ggtagtcagactggtctgaggctcaagcgacgagacattctgctgtggagcagtatccaa
aaagctttgaaacggggaggatcagttctgttgcctacttctgtgggttcacgtgttctg
gaggtgatccacatgctggatgatctatggaccaacaatcagaacagtcagcaaggagtc
accctggttctgcttactcatctgggtgctcgacttctggagtacgcttcttcgatgctg
gagtggatgtctccatctatcattgccgagtgggagaagaagaacgagtctccctttcag
acccgcaatttcaaaattgtgcattctatggaccagtttgacaaggtggtcaagggtgga
aacggccagtttgtcgttgtttctgtgggagaagatctggagtctggtttctcgagattg
ctgttcaaccggctggctagtgacgaacgaaacagtgttttgtttacagagagaagtgag
ggtaattctctggctacagagctgcaggacaagtgggagaagacggaaagagatggaaac
tccgcgaagatggacttccaaacaaccctcaagatgcctacttacactcctctgtccgaa
gccgaaatgaaggaatacaggacgaccgtggagagtcaacagaaggatctacaaatggtc
aaggcgatggagctgcgtaacaaggagcttcttgaggaggccgaagccgaggagatgatg
gactcttcagacgatgaagatgtatctcgaatgcaaggatctggtcaggagtatggtttc
ttacacggaacagtgctcgatgtggacgtcagagacgctgttgggtcgttgcgaaacttt
ccattctatcagaagcgtcaacgagtgtctgaatacggtattcctatccatccgtccgac
tttgcacgtgtggaggaacgacccgaagttgcatggaaggagcgagatcgaaatgaattt
gacagtgacgagcctcgaaagcgacagagacgacgaacaaaggctgctgccgaggagcag
gaagaacgggtggtggaagatgcagacgatgcacctgagactatcacttcccttgataat
cagcccattagagttagctacgaagatgtggatctcaacattatctgtcacgttgacttc
gtcgatctctctggtcgtattgatgagcgatccctcggtatgattatgcattctattcat
cccaagaagcttcttcttttggacgattctcgacgagctgatgatctctgttcatatctc
aagcgagaagacgacacagacgttcatgtgcttcgaggacttactactgccggcacgcat
tcatttgcagttgatatccagctcacccctgagctgtctcgcctgctcaattggcagcaa
ctttccggcggcctgtctttggcccatgtggtgggtaaggttgccaagaacgaagataag
tcggaagacacgcccctagctgcattggctctgcaacccattgtcgatgctgccgatctg
gcagttgctcctcgaattgagcctcttcgagttggcgatattcgtctcgcggagctcaaa
caggccctgggcaagttgggattccgagccgtcttccaagctggaggagtgttggtggtt
gatggcaaggttagcattcgcaaagtggacgagtctaatctggtggttgatggtggaatt
ggttctgatttctacgccatcaaggaggtggttcgggctcaattggctcagattggttag
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