Yarrowia lipolytica: 2909846
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Entry
2909846 CDS
T01033
Symbol
YALI2_B00398g
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
yli
Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2909846 (YALI2_B00398g)
03041 Spliceosome [BR:
yli03041
]
2909846 (YALI2_B00398g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2909846 (YALI2_B00398g)
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2909846 (YALI2_B00398g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
2909846 (YALI2_B00398g)
mRNA cycle factors
Common to processing body (P body) and stress granule
2909846 (YALI2_B00398g)
Spliceosome [BR:
yli03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
2909846 (YALI2_B00398g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
2909846 (YALI2_B00398g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
2909846
NCBI-ProteinID:
XP_502093
UniProt:
Q6CB69
A0A1D8NC48
LinkDB
All DBs
Position
B:complement(2198276..2200132)
Genome browser
AA seq
618 aa
AA seq
DB search
MSELENGVKSLNLNNDTPAAPRSKYVPPHRAKAAATGNGTSNSAPSNDRREAGRNLYSQY
SNSFQNNSRGSYGGGYGGGRGGRGGRSWGNDGGYRGGFRDPSQGSFVDGKHVPGPRNERT
EVEIFGVANDERFQSTGINFDNYDEIPVEATGNDVPEPINAFTSPPLEEHLLTNIKLARY
NKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSQSFFHGPSPTPQPTGPRHMH
KKAYPTALVLAPTRELVSQIYDEAKKFAYRSWVRPCVVYGGADIGEQMRNIERGCDLLVA
APGRLVDLIDRGKVSLENIKYLVLDEADRMLDMGFEPQIRAIVQGSGMPDVNERQTLMFS
ATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDGDKISALLDILSAAGKGL
TLVFVETKRGADYLCDVLQSEDFPATSIHGDRSQRDRERALEMFRDGTTPILVATAVAAR
GLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNKGIVRELIDILKEA
HQDVPQFLESTAREASYGGRGGGRGRGGFGGGRSRATQDFRKQGGGFGSNDRFGGSSGGS
SYGGGSSYGNQGGNNNWW
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactcgaaaatggtgtcaagtcgttgaatctgaacaacgacacccccgctgct
ccccgaagcaagtacgtgcccccccaccgggccaaggctgccgccaccggtaacggaacc
tccaactccgccccctccaacgaccgacgagaggctggccgaaacctgtactcccagtac
tccaactccttccagaacaactcccgaggctcctacgggggaggctacggaggtggtcga
ggcggtcgaggcggtcgatcttggggtaacgacggtggctaccgaggtggcttccgagac
ccctcccagggctctttcgtggacggtaagcatgtccccggcccccggaacgagcgaacc
gaggttgaaatcttcggcgttgctaacgacgagcgattccagtccaccggtatcaacttt
gataactacgacgagattcccgtcgaggccaccggtaacgacgtgcccgagcccatcaac
gctttcacctctcctcccctcgaggagcacctgctgactaacatcaagcttgctcgatac
aacaagcccacccccgtccagaagtactctgtccccattgttgctgctggccgagacctg
atggcctgtgcccagaccggttctggtaagaccggaggattcctcttccccgttctgtcc
cagtccttcttccacggtccctcccccaccccacagcccactggccctcgacacatgcac
aagaaggcctaccccactgcccttgtgcttgctcccacccgagagcttgtgtcgcagatc
tacgacgaggccaagaagttcgcctaccgatcctgggtccgaccttgcgtcgtctacggt
ggtgccgacattggcgagcagatgcgaaacattgagcgaggctgcgacctccttgttgct
gctcccggtcgactcgtcgatctgatcgaccgaggcaaggtctctctggagaacatcaag
taccttgtccttgatgaggccgaccgaatgctcgatatgggtttcgagccccaaatccga
gccatcgtccagggctccggcatgcccgacgttaacgagcgacagaccctcatgttctcc
gccacctttccccggaacatccagatgctggcccgagacttcctcaaggactacatcttc
ctgtctgtcggccgtgtcggttccacctccgagaacatcacccagaaggtcgagtatgtt
gaggatggagacaagatctctgctctgctcgacattctctctgccgctggcaagggcctg
accctggtcttcgtcgagaccaagcgaggtgccgattacctctgtgatgttctgcagagc
gaggacttccccgccacctccattcacggagaccgatctcagcgagaccgagagcgagct
ttggaaatgttccgagacggaactacccctattctggtcgccactgccgtcgctgctcga
ggcctggatatccccaacgttacccacgttgttaactacgatctccccaccgacattgac
gattacgtccaccgaatcggtcgaactggccgagccggaaacaccggtattgccaccgcc
ttcttcaaccgaggcaacaagggtattgtgcgagagctcatcgatatcctcaaggaggcc
caccaggacgttcctcagttcctcgagtccactgcccgagaggcctcttacggaggccga
ggcggaggccgtggccgaggtggcttcggtggaggccgatctcgagctacccaggatttc
cgaaagcagggtggcggctttggctccaacgaccgattcggaggctcctccggcggctct
tcttacggtggcggctcctcttacggtaaccagggtggtaacaacaactggtggtaa
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