Yarrowia lipolytica: 2910395
Help
Entry
2910395 CDS
T01033
Symbol
YALI2_D01113g
Name
(RefSeq) Pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2910395 (YALI2_D01113g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2910395 (YALI2_D01113g)
03041 Spliceosome [BR:
yli03041
]
2910395 (YALI2_D01113g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
2910395 (YALI2_D01113g)
Spliceosome [BR:
yli03041
]
Complex B
Other components
Prp19-related factors
2910395 (YALI2_D01113g)
Complex C
2910395 (YALI2_D01113g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
TPR_14
HAT_PRP39_N
Suf
Mad3_BUB1_I
ARM_TT21
CSN7_HB_subdom
NRDE-2
Hepatitis_core
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
2910395
NCBI-ProteinID:
XP_502246
UniProt:
Q6CAR6
A0A1D8NCM6
LinkDB
All DBs
Position
D:complement(137928..140138)
Genome browser
AA seq
736 aa
AA seq
DB search
MSQHELDIASSPGDVRPWIRYISSVKNDKTTARQKCILFERAVTALPRSYKLWKEYLDFR
SGLCTGLNPIKHADEYDRVNALYEKSLVLLHKMPVIWLQYLQFLMLQPKVTKTRSVINEA
LRSLPVQQHPRVLKLALQFGTKVGGPTSVQIWKRYVLAYPDQKETMAQSLIKMGYHGEAA
VVLIELLNASGDNYALWTELVDLIGESDKLTLEPPVEQIISSGIKRFPDQRGPLTVQLAN
FLVRNGDLESARDVFEDGITTANTVRDFTVVFDAYAEFEERIVTHLIENESPMADLRIAK
LDHLLERRPFLISDVRLRREPYSVLEWQKRIALYEDPAETVAAYTEAVQSIPPAKADGKL
SQLWISWAKFYAEDRETACEIYHKATLVPYKSVSELADVYLAWSQYESENDHWENAVKII
KQALESPNTHVSYHNSDLTAQDRIHKSVRLWSYYADLVESYGTFEETKQVYEKIMALDLL
TPLFVVNYATLLEENDHFEEMFKVYEKGISLFEESAFEIWNLYLVKASPRLGLERLRDLF
EDAISKFPTQKALYILYGKLEEDRGLVRNAMRVYSAMCDHVKTSETFKYYIGRTVENFGL
AATRPVYDKALESLPNRDASELALDYAQMEEKLGEIDRARAIYGYGSQFSDPQIIKYYDA
WHKFEVAHGTEDTFKDMLRIKRSIQAQFNTDIHYATTAAEVKKGTVQEFVKGETVQKGNI
EPPVAQANEDEIELDI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacacgaattggatatcgcctccagtcctggcgacgtgcgtccatggatccgg
tacatttcgtccgtcaaaaacgacaagactaccgcgcgacaaaaatgcatactctttgag
cgtgccgtcacagcccttccacggtcatataagctgtggaaagagtatcttgactttcga
agtggcctgtgcacgggtctgaatccaatcaagcacgccgacgagtacgatcgcgtcaat
gcgctctacgagaaatctctggtgctgctccacaaaatgcccgtcatctggttacagtac
ctgcagtttctgatgctgcaacccaaggtgacgaaaaccagaagcgtcatcaacgaggct
ctgcggtcattaccagtgcaacaacatccccgagtgctgaaactggcgctgcagtttggt
acaaaggtaggaggacccacaagcgtgcagatttggaaacgatatgtactggcatatcct
gatcagaaggagactatggctcaatcattgattaagatgggatatcatggagaggcagct
gttgttcttattgagcttttaaatgcatccggagacaactacgcactttggacggaactt
gtggacctgataggagagagcgacaagctgacgctggagcccccggtggaacagatcatt
tcatcgggtattaagcggtttcccgaccagagaggacccctcaccgtgcaattggcaaac
tttctggttcgaaacggcgatctggagtccgccagagacgtgtttgaggacggaatcaca
acagccaacacggtgcgagacttcactgttgtgtttgatgcatatgccgagtttgaggag
cgaatcgtgacacatctgattgaaaacgagtcgccaatggccgatttgcggatcgctaaa
ttggaccatctccttgaacgacgcccctttctcatctctgatgtgcgactacgacgagaa
ccgtactcagtccttgagtggcagaaacgaattgccctctacgaggatcccgctgagact
gtggctgcatacaccgaggcagttcagtccattccacctgcaaaggctgacggaaagctg
tcgcaactgtggatctcctgggctaaattttacgcagaagatcgagaaaccgcatgtgaa
atctatcacaaggccactctggtgccctacaagtctgtgtctgagctggcagacgtctac
ctggcatggagtcaatatgagagtgaaaacgaccattgggagaacgcagtcaaaatcatc
aagcaagcgttggagtctcccaacacacacgtttcttaccacaactcggacctgacggct
caggatcgaattcacaagagtgtgcgtctgtggtcgtactacgccgacttggttgagtcg
tacggaacatttgaagagacgaaacaagtgtatgagaaaatcatggcgctagatctgctg
acccctctgtttgtggtcaactacgccaccttgctggaagaaaacgaccatttcgaagaa
atgttcaaggtctatgagaagggaatctcgctgtttgaagagagcgcatttgaaatctgg
aacctgtatttggttaaggcttctccccgtttgggactggagcgattgagagacttgttt
gaagatgcaatttcgaagttcccaacacaaaaggccctctatattctctacggtaagctt
gaggaggataggggactggtgagaaacgcgatgagggtgtactcggccatgtgtgaccat
gtcaagacttcggagacgttcaagtactatatcggtcgaactgtggagaactttggtctt
gcggctacccgacctgtctacgataaggctctcgagtctcttcctaatagggacgcttct
gagcttgctttggactatgctcagatggaggagaagctgggtgagattgaccgagcgagg
gccatctacggctacggctctcagttctccgatcctcagattatcaaatattacgacgca
tggcacaagtttgaggttgcccacggtaccgaagacacattcaaggatatgttgcgaatc
aagcggtcaatccaggcccagttcaacacagacatccactatgccaccacagcagccgaa
gtcaagaaggggactgttcaggagttcgtcaagggtgaaactgtgcagaaaggcaacatt
gagcctcctgttgcccaggctaacgaggatgagatcgagcttgatatttaa
DBGET
integrated database retrieval system
